Yes indeed...the suffix prefix distinction is very important. All top decoy tools expect decoys to be labeled with prefix.
David On May 20, 2014 11:19 PM, "钟传奇" <[email protected]> wrote: > Hi, I have used Mayu integrated in TPP to analyze my data. > The log file of Mayu showed that there is no decoy proteins found, and the > log file is in the attachment. > I generated my database for searching with other tools than the " > reverse_fasta.pl" tool in the Mayu, and set the parameter "Tag (prefix) > for decoy proteins" as "_REVERSED". > I am wondering that the decoy proteins in my database fasta is > tagged(Suffix) "_REVERSED", has this any effect on Mayu performance? > > Any suggestion will be welcomed. > > Thanks. > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at http://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
