Thank David for reply. So the only way is that I have to search my data against the database with decoy proteins tagged prefix "rev_".
On Wed, May 21, 2014 at 11:23 PM, David Shteynberg < [email protected]> wrote: > Yes indeed...the suffix prefix distinction is very important. All top > decoy tools expect decoys to be labeled with prefix. > > David > On May 20, 2014 11:19 PM, "钟传奇" <[email protected]> wrote: > >> Hi, I have used Mayu integrated in TPP to analyze my data. >> The log file of Mayu showed that there is no decoy proteins found, and >> the log file is in the attachment. >> I generated my database for searching with other tools than the " >> reverse_fasta.pl" tool in the Mayu, and set the parameter "Tag (prefix) >> for decoy proteins" as "_REVERSED". >> I am wondering that the decoy proteins in my database fasta is >> tagged(Suffix) "_REVERSED", has this any effect on Mayu performance? >> >> Any suggestion will be welcomed. >> >> Thanks. >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to [email protected]. >> To post to this group, send email to [email protected]. >> Visit this group at http://groups.google.com/group/spctools-discuss. >> For more options, visit https://groups.google.com/d/optout. >> > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at http://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
