Dear Tercilio, I am not familiar with these peaklist.xml files, so I cannot answer your question. However, I am forwarding it to the [email protected] discussion list to appeal to crowd expertise. If you are not joined to this group, I encourage you to do so. I hope someone can have an answer for you.
I will make two quick points: - You mention PMF. TPP does not have any tools to process PMF data. You will need to look elsewhere for that - TPP can help with standard shotgun MS/MS data. The main trick will be to get your peaklist.xml spectra into the mzML format. If you can do that, then it should be relatively easy. Anyone know how to transform peaklist.xml files into mzML files? Maybe CompassXport can do it? Regards, Eric Em Quinta-feira, 26 de Março de 2015 10:30, Tercilio Calsa Jr < [email protected]> escreveu: Hello, We´ve been working on plant proteomics, and we´d like to know if it´s possible to use TPP to identify peptides/proteins from peaklist.xml files, obtained after analysis in MALDI-ToF (PMF, MS/MS) in Bruker Autoflex mass spectrometer. In attachment you have two example files we got. Please, if it´s the case, could you inform how to proceed? Thank you. Best regards, Tercilio ********************************************************* Tercilio Calsa Junior Professor Adjunto - CCB - UFPE Biologia Molecular de Plantas tel: +55(81)21268569/21267829 e-mail: [email protected] / [email protected] skype: terciliojr ********************************************************* -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
