Hi, when i am running my mzML data using comet i got load spectra Number is 694. when i am running the same data in mzXML format using same comet parameters the load spectra Number is 4508. Is it possible to get different number of spectra in different format for same data? can any one tell what may be the reason?
*EXECUTING: cd c:/Inetpub/wwwroot/ISB/data/mzXML& c:\Inetpub\tpp-bin\comet -Pc:/Inetpub/wwwroot/ISB/data/parameters/comet.params -Nc:/Inetpub/wwwroot/ISB/data/parameters/17052016_NISHAD_ITRAQ_1 -Dc:/Inetpub/wwwroot/ISB/data/parameters/Chicken_DECOY.fa 17052016_NISHAD_ITRAQ_1.mzXML * Comet version "2016.01 rev. 2" Search start: 06/18/2016, 02:08:00 AM - Input file: 17052016_NISHAD_ITRAQ_1.mzXML - Load spectra: 4508 *EXECUTING: cd c:/Inetpub/wwwroot/ISB/data& c:\Inetpub\tpp-bin\comet -Pc:/Inetpub/wwwroot/ISB/data/parameters/comet.params -Nc:/Inetpub/wwwroot/ISB/data/parameters/17052016_NISHAD_ITRAQ_1 -Dc:/Inetpub/wwwroot/ISB/data/parameters/Chicken.fa 17052016_NISHAD_ITRAQ_1.mzML * Comet version "2016.01 rev. 2" Search start: 06/18/2016, 03:22:02 PM - Input file: 17052016_NISHAD_ITRAQ_1.mzML - Load spectra: 694 -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
