Hello Adam, I was able to generate a heatmap just running the tool on your files. I am not sure why this would be broken for you. Which version are you using at the moment? Perhaps you can try our latest release candidate.
-David On Fri, Oct 27, 2017 at 7:51 AM, Adam R <[email protected]> wrote: > Hi David, > > I have attached the prot.xml files to this post. Thank you for checking > this out. > > Best, > > Adam > > > > On Tuesday, October 24, 2017 at 12:41:21 PM UTC-5, David Shteynberg wrote: >> >> Hi Adam, >> >> I verified on my system that I can generate a heatmap on some test data. >> If you can transfer your protXML files to me I can try to troubleshoot. >> >> -David >> >> On Mon, Oct 23, 2017 at 8:24 AM, Adam R <[email protected]> wrote: >> >>> Hi David, >>> >>> Besides the commands there was nothing else. I re-ran the analysis and >>> have included screenshots of the entire page. >>> >>> Best, >>> >>> Adam >>> >>> On Wednesday, October 18, 2017 at 1:04:31 PM UTC-5, David Shteynberg >>> wrote: >>>> >>>> Hello Adam, >>>> >>>> Was there any other output generated on the webpage from the rest of >>>> the commands? >>>> >>>> Thanks, >>>> -David >>>> >>>> On Wed, Oct 18, 2017 at 10:20 AM, Adam R <[email protected]> wrote: >>>> >>>>> I am running into an issue with the generation of the file in order to >>>>> compare four prot.xml files...the commands are run and say "successful" >>>>> but >>>>> no files are generated screenshot attached). Are there any recommended >>>>> settings to use for a first pass? I am using TPP v5.0.1-7604 >>>>> >>>>> Best, >>>>> >>>>> Adam >>>>> >>>>> >>>>> On Monday, October 16, 2017 at 12:47:56 PM UTC-5, Alexis Varin wrote: >>>>>> >>>>>> I used compare proteins tool to compare my prot.xml files. The >>>>>> command was successfull and I obtained the compare.xls.d3.html file >>>>>> containing the heatmap. Problem : the html is 80 Mb and nothing seems to >>>>>> be >>>>>> sturdy enough to open it, all browsers, 32 bits or 64 bits (and I really >>>>>> mean all) crash before (the PC has 32 Gb RAM but the browsers crash way >>>>>> before reaching that limit). >>>>>> >>>>>> What can I use to visualize the data ? I can see the html code fine >>>>>> with EmEditor for example (1.6 million lines) but seeing the heatmap >>>>>> proves difficult. >>>>>> >>>>>> Thanks for the help >>>>>> >>>>> -- >>>>> You received this message because you are subscribed to the Google >>>>> Groups "spctools-discuss" group. >>>>> To unsubscribe from this group and stop receiving emails from it, send >>>>> an email to [email protected]. >>>>> To post to this group, send email to [email protected]. >>>>> Visit this group at https://groups.google.com/group/spctools-discuss. >>>>> For more options, visit https://groups.google.com/d/optout. >>>>> >>>> >>>> -- >>> You received this message because you are subscribed to the Google >>> Groups "spctools-discuss" group. >>> To unsubscribe from this group and stop receiving emails from it, send >>> an email to [email protected]. >>> To post to this group, send email to [email protected]. >>> Visit this group at https://groups.google.com/group/spctools-discuss. >>> For more options, visit https://groups.google.com/d/optout. >>> >> >> -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at https://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
