Thanks for your help. Updated to 5.1 solved the issue. Sorry it took me awhile to set it up and try out.
All the best, Emma On 25 June 2018 at 12:39, David Shteynberg < [email protected]> wrote: > Hi Emma, > > I think you are a version behind. Can you please try the latest version > to see if it fixes the issue you've observed? > > Thank you, > -David > > On Sat, Jun 23, 2018, 3:38 PM Emma Whittington <[email protected]> wrote: > >> Hi David, >> >> I am using TPP 5.0.0. The modifications I'm specifying are M,15.994915 >> STY,79.9663 K,79.9663. >> >> Thanks >> >> On 22 June 2018 at 18:28, David Shteynberg <David.Shteynberg@systemsbiolo >> gy.org> wrote: >> >>> Hi Emma, >>> >>> Which version of the TPP are you running? Which modifications are you >>> specifying when you run the tool? >>> >>> Thanks, >>> -David >>> >>> On Fri, Jun 22, 2018 at 11:44 AM, Emma Whittington <[email protected]> >>> wrote: >>> >>>> Good afternoon, >>>> >>>> I've trying to use PTMprophet to analyse my data and keep getting the >>>> following error. Do you have any idea what's happening? >>>> >>>> INFO: Writing file bursa.ptmp.pep.xml ... >>>> INFO: Reading file bursa.ptm.ipro.99.pep.xml ... >>>> WARNING: Illegal peptide with unknown mod: WYNWGSYDASSGEC[160]C[160]K >>>> WARNING: Unrecognized mod on peptide: >>>> LPLYM[147]STK[170]NTILK[170] >>>> WARNING: Cannot initialize for sequence: LPLYM[147]STK[170]NTILK[170], >>>> unknown mods may exist in spectrum AkankshaSingh10356322_HighMW_1 >>>> 0.09626.09626.4 >>>> Segmentation fault (core dumped) >>>> >>>> >>>> thank you very much, >>>> >>>> Emma >>>> >>>> -- >>>> You received this message because you are subscribed to the Google >>>> Groups "spctools-discuss" group. >>>> To unsubscribe from this group and stop receiving emails from it, send >>>> an email to [email protected]. >>>> To post to this group, send email to [email protected]. >>>> Visit this group at https://groups.google.com/group/spctools-discuss. >>>> For more options, visit https://groups.google.com/d/optout. >>>> >>> >>> -- >>> You received this message because you are subscribed to the Google >>> Groups "spctools-discuss" group. >>> To unsubscribe from this group and stop receiving emails from it, send >>> an email to [email protected]. >>> To post to this group, send email to [email protected]. >>> Visit this group at https://groups.google.com/group/spctools-discuss. >>> For more options, visit https://groups.google.com/d/optout. >>> >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to [email protected]. >> To post to this group, send email to [email protected]. >> Visit this group at https://groups.google.com/group/spctools-discuss. >> For more options, visit https://groups.google.com/d/optout. >> > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at https://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
