Hi everyone, I've recently compiled a ptm.ipro.pep.xml file from 87 pep.xml files using the xinteract workflow. I'm running into an issue when I attempt to filter the ptm.ipro.pep.xml file and view the resulting peptide sequences and receive following error messages:
error with html display: XML parsing error: XML or text declaration not at start of entity, at xml file line 2244, column 17 error with html display: XML parsing error: XML or text declaration not at start of entity, at xml file line 3, column 0 The xml files were written and the job was completed, however I had to terminate the process as upon refresh the output was not shown (probably because of a server timeout?) The output file is rather large, at 3.2 GB in size. On initial opening without selecting any filtering options the file opens, but fails to load all entries when I apply a filter for minimum iProphet probability or protein text. Are these errors showing up because the viewer cannot handle the size of the file or is the file itself corrupted? What can I do to check if it's a file issue? Best, Adam -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
