Hello,
I cannot determine why RefreshParser would not be able to remap all entries.
Since the PSMs are derived from the fasta db used in the search, I would expect
all PSMs to map to their respective database entries. For example:
running: "/usr/local/tpp/bin/RefreshParser
'/tmp/X33oJO/data/SMC/16-18-27-6094/source/interact-a-2.pep.xml'
'/usr/local/tpp/data/dbase/human-reviewed-190128_DECOY-crap.fasta'"
- Building Commentz-Walter keyword tree...
- Searching the tree...
- Linking duplicate entries...
- Printing results...
Warning: could not map 3081 entries
command completed in 5 sec
Thanks in advance for any help.
Brian
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