Hi Goutham, The problem you have is likely fixed in the next release of the TPP (due in a few weeks). Or you can grab it from the release candidates we currently offer.
Cheers, Mike From: [email protected] [mailto:[email protected]] On Behalf Of Goutham Vasam Sent: Thursday, February 21, 2019 11:31 AM To: spctools-discuss Subject: [spctools-discuss] StPeter ERROR: Unknown modification: C[158] Hi, While running StPeter on TPP, I received an error with following details: StPeter: MS2 intensity-based label-free quantification Copyright 2015-2017, Jason Winget, Michael Hoopmann, Institute for Systems Biology Version 1.2.0 October 11 2017 ****** BEGIN StPeter ANALYSIS ****** Time at start of analysis: Thu Feb 21 14:23:02 2019 Parameters: degenerate peptides = no fdr = 0.01 sample load = 0 tolerance = 0.4 intensities = no Reading protXML: c:/TPP/data/Goutham/Proteomics_Run_December_2018_B_AA_30_60_120min_Raw_data/All_modifications/AA120_35_1/interact.ipro.prot.xml ERROR: Unknown modification: C[158] Please report to authors. Command FAILED RETURN CODE:256 I have attached the XML file and comet.params file. I emailed Dr. Hoopmann (as it said report to authors). If there are alternate ways, I would appreciate any help. Thank you! -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout. -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
