Hi; I'm getting an error when running PTMProphet 5.2.0. using MSFragger open search results and using the MASSDIFFMODE option. Without the option the program is able to finish without problems (same file), but when using MASSIFFMODE the program ends with a segmentation fault, see below:
> ./PTMProphetParser MASSDIFFMODE VERBOSE interact-01A.pep.xml interact.mod. pep.xml INFO: Applying PSM specific mass offset and tolerance ... INFO: Writing file interact.mod.pep.xml ... Creating 1 threads Wait for threads to finish ... INFO: Reading file interact-01A.pep.xml ... INFO: processed 31000/31545 spectrum_queries INFO: done ... INFO: Computing EM Models ... Iterating PTM Model: ....5....10....15....20....25....30....35....40....45. ...50....55....60....65....70....75....80....85....90....95....INFO: done ... INFO: done ... Creating 1 threads Wait for threads to finish ... INFO: Reading file interact-01A.pep.xml ... Segmentation fault (core dumped) Is there any other option that we should add to the run ? Thanks -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
