Hello everyone, Next week the TPP software tools team is hosting a *booth (#118) *at the ASMS Conference; we're listed as *Institute for Systems Biology *on the program.
Please feel free to drop by and say hello to me (Luis), David, Eric, and Michael, and bring your PeptideAtlas/TPP-related software and/or installation questions. We also have information on the recent TPP 5.2 release, as well as on our next *courses *in *Southampton *UK (BSPR Annual Meeting), *Seattle *USA (Cascadia Symposium), and *Adelaide *Australia (HUPO Congress). Or just come hang out between sessions. We will also be conducting an evening *Workshop *at ASMS on *Tuesday June 4th at 5:45pm in room A304*. We'll give a brief intro to the existing TPP tools and then encourage discussion about them and about future directions for the TPP. Topic leads for discussion are: *proteogenomics & PEFF applications*, analyzing PTMs with *PTMProphet*, cross-linking analysis with *Kojak 2.0*, and deploying the TPP using *Docker containers & cloud computing platforms*. So please come and learn about TPP and be part of the discussion about its future. Lastly, we will be presenting several *posters*: - * Kojak 2.0: New features for the analysis of cross-linked proteins * Michael Hoopmann *MP 044* - * End-to-End Integration of Known Variants and Modifications from PEFF into the Trans-Proteomic Pipeline for Enriched MS/MS Sequence Determination* Luis Mendoza *MP 417 * - *Computing Information Content of PTM Site Localization Assignments Using PTMProphet *David Shteynberg *WP 400* Other posters related to TPP: - * Proteomics Standards Initiative (PSI) Universal Spectrum Identifier (USI)* Eric Deutsch *MP 439* - *Proteomics Standards Initiative Extended FASTA Format (PEFF)* Pierre-Alain Binz *MP 438* More information at: * http://www.tppms.org/asms/ <http://www.tppms.org/asms/> * Please let your coworkers or any other interested people know, too! Also, please let us know if you have a poster or oral presentation of research that makes use of the TPP; we'll try to drop by and visit. Thanks, --Luis, David, Eric, and Michael -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/CACyS9bquMwfacT656fzxVuQMzKX%3D_FWXqpMbQ4bYaEK27gpssQ%40mail.gmail.com. For more options, visit https://groups.google.com/d/optout.
