Hi Carlos, The TPP is statistical software that takes advantage of statistical trends in data and requires many data points to work well. Do you have a dataset of reasonable size with maybe dozens or hundreds of spectra? Also can you post the file somewhere I can download it? Sending files as email attachments may not work for larger files.
Thanks, -David On Mon, Jul 20, 2020 at 5:12 PM Carlos Humberto Paván <charlypa...@gmail.com> wrote: > Dear David > Thank you your answer and your offer. Of course I can send you the > dataset. I have attached it. You will note this is a small number of > spectrums. > Looking forward your comments > > PS I have attached the interact file too with the 0 prob result. > > El lunes, 20 de julio de 2020, 13:29:42 (UTC-3), David Shteynberg escribió: >> >> Dear Carlos, >> >> There is probably some bug exposed by the modeling of this type of data >> with the specific set of options you enabled. If you are able to share a >> part of your dataset that can replicate the issue, I am able to >> troubleshoot this further. >> >> Thanks, >> David >> >> On Sat, Jul 18, 2020, 12:10 PM Carlos Humberto Paván <charl...@gmail.com> >> wrote: >> >>> Dear all >>> >>> I have recently installed TTP 5.2 and I´m still learn about it. I´m >>> stuck at the peptide validation process: I get the follow error next to run >>> Peptide Prophet: >>> "Initialising statistical models ... >>> >>> command "C:/TPP/bin/PeptideProphetParser >>> "/tmp/a04412/params/interact.pep.xml" MINPROB=0.0 CLEVEL=-1 PPM MALDI" >>> failed: Unknown error >>> >>> command "C:/TPP/bin/PeptideProphetParser >>> "/tmp/a04412/params/interact.pep.xml" MINPROB=0.0 CLEVEL=-1 PPM MALDI" >>> exited with non-zero exit code: 255 >>> QUIT - the job is incomplete" >>> >>> The data is from a 4800 MALDI, a single spot from gel. >>> >>> Regards and Thanks >>> >>> -- >>> You received this message because you are subscribed to the Google >>> Groups "spctools-discuss" group. >>> To unsubscribe from this group and stop receiving emails from it, send >>> an email to spctools...@googlegroups.com. >>> To view this discussion on the web visit >>> https://groups.google.com/d/msgid/spctools-discuss/06da8ba0-99b1-4599-88b0-2743964e44ceo%40googlegroups.com >>> <https://groups.google.com/d/msgid/spctools-discuss/06da8ba0-99b1-4599-88b0-2743964e44ceo%40googlegroups.com?utm_medium=email&utm_source=footer> >>> . >>> >> -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to spctools-discuss+unsubscr...@googlegroups.com. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/585fd4e1-bf51-4d3b-a96d-28a6702b7a6eo%40googlegroups.com > <https://groups.google.com/d/msgid/spctools-discuss/585fd4e1-bf51-4d3b-a96d-28a6702b7a6eo%40googlegroups.com?utm_medium=email&utm_source=footer> > . > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/CAGJJY%3D8r4qRLEyj0Za-CZXd%3DN_HMqCxiOL8u-P4SG-vD93JYuA%40mail.gmail.com.
