Hi Malcolm, Thanks for your interest in the TPP. I think your url has a mistake in it. Please try the following command:
svn checkout http://svn.code.sf.net/p/sashimi/code/tags/release_6-1-0 <http://svn.code.sf.net/p/sashimi/code/tags/release_6.1.0> Cheers, -David On Tue, Jun 7, 2022 at 3:44 PM Malcolm Cook <[email protected]> wrote: > Hi, > > I am checking out again from the release_6.1.0 since my `make all` is > problematic, I want to start over, and `make clean` seems perhaps > incomplete in its cleaning. > > Alas I encounter this error whose workaround I can not guess: > > svn checkout http://svn.code.sf.net/p/sashimi/code/tags/release_6.1.0 > svn: E170000: URL ' > http://svn.code.sf.net/p/sashimi/code/tags/release_6.1.0' doesn't exist > > > On Tuesday, June 7, 2022 at 12:37:31 AM UTC-5 Luis wrote: > >> Hi Malcolm, >> Thank you for the congrats, and for catching that in our build notes; we >> will correct it soon. In the "Pulling from Sourceforge" section, just >> follow the commented-out command instead of the last one: >> >> #svn checkout http://svn.code.sf.net/p/sashimi/code/tags/release_6.1.0 >> <----- this one; remove the leading pound sign >> svn checkout >> http://svn.code.sf.net/p/sashimi/code/trunk/trans_proteomic_pipeline <---- >> not this one >> >> >> As of tonight, though, the trunk code is still virtually identical to >> what is tagged as release_6.1.0, so it should work fine. >> >> Let us know if you run into any other issues. >> >> Thank you for using TPP! >> --Luis >> >> >> On Mon, Jun 6, 2022 at 10:04 PM malcook <[email protected]> wrote: >> >>> Congrats on the new release. >>> >>> You will probably want to modify these instructions >>> <http://tools.proteomecenter.org/wiki/index.php?title=TPP_6.1.0:_Installing_on_Ubuntu_20.04_LTS>which >>> still advise to download from trunk. >>> >>> I just followed them. >>> >>> Should I still expect this to work satisfactorily? >>> >>> Thanks >>> >>> On Friday, June 3, 2022 at 3:23:19 AM UTC-5 Luis wrote: >>> >>>> Announcing the official release of Trans-Proteomic Pipeline (TPP) 6.1.0 >>>> "Parhelion" >>>> >>>> We are proud to offer a major update to the Trans-Proteomic Pipeline >>>> (TPP) software, release 6.1.0. The software is available for Windows as >>>> well as Linux from all the usual locations (please see the section below, >>>> "Getting the TPP Software"). Most users are recommended to use the Windows >>>> installer, which installs and configures TPP and other required software, >>>> such as a web server. For advanced users who need to customize TPP, or for >>>> those who run on Linux or OS X, the source code can be downloaded. >>>> >>>> >>>> *Release Notes * >>>> Release notes on the most important new features, changes, and known >>>> issues are available at: >>>> >>>> http://tools.proteomecenter.org/wiki/index.php?title=TPP:6.1.0_Release_Notes >>>> >>>> >>>> *Getting the TPP Software* >>>> Download the TPP version 6.1.0 native windows installer from the >>>> Sashimi SourceForge project file release page: >>>> https://sourceforge.net/projects/sashimi/files/Trans-Proteomic >>>> Pipeline (TPP)/TPP v6.1 (Parhelion) rev 0/ >>>> >>>> Everyone is encouraged to read and contribute to our wiki, at >>>> http://tools.proteomecenter.org/wiki/ >>>> >>>> For guides to installing and using our software, please see our wiki: >>>> http://tools.proteomecenter.org/wiki/index.php?title=Software:TPP >>>> >>>> For downloading the source code, please go to the following link: >>>> http://sourceforge.net/projects/sashimi/files/ and find the 6.1.0 >>>> source code .zip package >>>> or, check out the code directly from svn: >>>> svn export svn://svn.code.sf.net/p/sashimi/code/tags/release_6-1-0 >>>> >>>> For building from source, please refer to the README and INSTALL files >>>> in src/ directory of TPP as well as the wiki. >>>> >>>> >>>> *Acknowledgements* >>>> The TPP Team: David, Luis, Mike, Eric, Jimmy, plus all other developers >>>> who contributed to this release from ISB. Thanks to developers and users >>>> from the TPP's user community who also provided feedback and code >>>> contributions. >>>> >>>> >>>> -- >>> You received this message because you are subscribed to the Google >>> Groups "spctools-discuss" group. >>> To unsubscribe from this group and stop receiving emails from it, send >>> an email to [email protected]. >>> To view this discussion on the web visit >>> https://groups.google.com/d/msgid/spctools-discuss/60dc756c-e679-4a3a-bd6b-74856abfe499n%40googlegroups.com >>> <https://groups.google.com/d/msgid/spctools-discuss/60dc756c-e679-4a3a-bd6b-74856abfe499n%40googlegroups.com?utm_medium=email&utm_source=footer> >>> . >>> >> -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/c874b6a5-f866-40bc-b103-cffb5c939acdn%40googlegroups.com > <https://groups.google.com/d/msgid/spctools-discuss/c874b6a5-f866-40bc-b103-cffb5c939acdn%40googlegroups.com?utm_medium=email&utm_source=footer> > . > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. 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