Hi,

Currently one can reference an equation using :eq:`some_id`, but it only 
works in one file (see here for more details: 
http://sphinx.pocoo.org/ext/math.html). I would like this to work across all 
the files in the documentation, so that I can write my thesis in sphinx.

What is the best way to implement this? I think that we need to modify how 
the equation numbers are handled (so that it doesn't start from (1) in each 
document, but there is some global counter), I am not sure about the rest 
yet.

Thanks,
Ondrej

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