Paul, the problem seems that you erased the bootblock and the logs show that you did not write anything to that block. All the rest seems to be flashed OK, but the boot code is in the boot block. Can you please post the commands you used, not just the output?
As for flashing the compiled image - what do you mean by "not running"? Not started or binaries missing? If they are missing, it probably means that something went wrong during build process, i.e. missing dependencies. Did you look at the build output carefully (you can send us compressed build.log file)? It is very important - as the last step make compares target.list (the list of all files that are supposed to be installed) and target.list.new (list of the files that re going to be installed in your build) and.warns you if there are any differences. If you did not add any custom programs and did not change the release number (used in the archive filename) - there should be no differences, you need to resolve any before flashing the image to the camera. Andrey
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