Glenn, Pascal's tool has a bug, but an interesting one. If two place nodes are in the exact same place, one of them is picked up as an unmapped place for some reason. I guess Pascal's process somehow only allows roads to be picked once. While that is a bit silly, it does identify duplicate place nodes.
As you seem to already have found out :) (but I wrote this while you were writing your second mail) And yes, deleting that extra node without the relation is the easiest solution. In some cases, the duplicate might have some meaningful tags. Marc, I don't see any specialist knowledge required, as long as you keep the node that's in a relation.
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