Hi Michael,
I am not super knowledgeable about this, but the plugin does it like this:
BiomobyActivityConfigurationBean bean =
getActivity().getConfiguration();
Map<String,String> secondaries = bean.getSecondaries();
ParametersTable table = getActivity().getParameterTable();
int rows = table.getModel().getRowCount();
for (int i = 0; i < rows; i++) {
String key = (String)table.getModel().getValueAt(i,0);
String value = table.getModel().getValueAt(i,1).toString();
secondaries.put(key, value);
}
Edit<?> dummyEdit =
EditsRegistry.getEdits().getConfigureActivityEdit(getActivity(), bean);
Dataflow dataflow = FileManager.getInstance().getCurrentDataflow();
try {
EditManager.getInstance().doDataflowEdit(dataflow,
dummyEdit);
} catch (IllegalStateException e) {
} catch (EditException e) {
}
I guess if you have access to the activity, you can get the config bean and
manipulate the secondaries that way. Again, I am not super knowledgeable
about this, but this could do the trick for you.
Eddie
-----Original Message-----
From: Michael Gerlich [mailto:[email protected]]
Sent: May-20-09 5:04 AM
To: List for general discussion and hacking of the Taverna project
Subject: [Taverna-hackers] Taverna + BioMoby services
Hi,
I'd like to know if/how it is possible to programmatically change the
parameters of a Biomoby service.
Within Taverna, one can click the "configure service" button which then
lists all the secondary input parameters a Biomoby service has. How can
I lookup and change these values from within external code (e.g. a
commandline-app or a webapp), using a Dataflow object representing a
workflow that contains a Biomoby service.
Do I have to use the Edits interface to configure Biomoby service instances?
Regards,
Michael
--
Michael Gerlich
Group Bioinformatics & Mass Spectrometry
Leibniz Institute of Plant Biochemistry
06120 Halle, Germany
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------------------------------------------------------------------------------
Crystal Reports - New Free Runtime and 30 Day Trial
Check out the new simplified licensing option that enables
unlimited royalty-free distribution of the report engine
for externally facing server and web deployment.
http://p.sf.net/sfu/businessobjects
_______________________________________________
taverna-hackers mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/taverna-hackers
Developers Guide: http://www.mygrid.org.uk/usermanual1.7/dev_guide.html
FAQ: http://www.mygrid.org.uk/wiki/Mygrid/TavernaFaq
