Perhaps you could attach your
C:\Users\Gott\AppData\Roaming\taverna-2.0\repository\com\github\cdktaverna\cdk-activity\0.6\cdk-activity-0.6.pom
file? To be sure the encoding is not affected by the email systems,
try zip-ing it first, so we can check what funny UTF entries have made
their way in there byte by byte..

You could also try editing the file manually and make sure there are
no non-ASCII characters in there, for instance in developer names. (If
they are there in UTF-8 it should have worked, though - but if your
editor is set to use a different encoding like Latin 1 the XML file
would generally not be valid)


On Thu, Dec 10, 2009 at 13:03, Andreas Truszkowski <[email protected]> wrote:
> Hello together,
>
> I am trying to run my developed taverna plugin into the taverna workspace.
> I always got I/O errors. Also I tried to change the file format but with no 
> effect. My OS is Windows 7 (Perhabs it is important :)) On the bottom I 
> attached the stack trace.
>
> Regards
> Andreas
>
> 10.12.2009 13:52:34 net.sf.taverna.raven.plugins.PluginManager ?
> WARNUNG: Plugin net.sf.taverna.t2.all-activities:all-activities v.0.4 depends 
> on unknown plugin Plugin net.sf.taverna.t2.core v0.4 (by taverna.sf.net)
> 10.12.2009 13:52:37 net.sf.taverna.raven.plugins.PluginManager ?
> WARNUNG: Plugin net.sf.taverna.t2.all-activity-uis:all-activities v.0.4 
> depends on unknown plugin Plugin net.sf.taverna.t2.core v0.4 (by 
> taverna.sf.net)
> 10.12.2009 13:52:37 net.sf.taverna.raven.plugins.PluginManager ?
> WARNUNG: Plugin net.sf.taverna.t2.all-activities:all-activities v.0.4 depends 
> on unknown plugin Plugin net.sf.taverna.t2.core v0.4 (by taverna.sf.net)
> 10.12.2009 13:52:39 net.sf.taverna.raven.plugins.PluginManager ?
> WARNUNG: Plugin 
> net.sf.taverna.t2.all-activity-translators:all-activity-translators v.0.4 
> depends on unknown plugin Plugin net.sf.taverna.t2.workbench v0.4 (by 
> taverna.sf.net)
> 10.12.2009 13:52:39 net.sf.taverna.raven.plugins.PluginManager ?
> WARNUNG: Plugin 
> net.sf.taverna.t2.all-activity-translators:all-activity-translators v.0.4 
> depends on unknown plugin Plugin net.sf.taverna.t2.core v0.4 (by 
> taverna.sf.net)
> 10.12.2009 13:52:39 net.sf.taverna.raven.plugins.PluginManager ?
> WARNUNG: Plugin net.sf.taverna.t2.all-activities:all-activities v.0.4 depends 
> on unknown plugin Plugin net.sf.taverna.t2.core v0.4 (by taverna.sf.net)
> 10.12.2009 13:52:39 net.sf.taverna.raven.repository.impl.ArtifactImpl ?
> WARNUNG: IO error for 
> C:\Users\Gott\AppData\Roaming\taverna-2.0\repository\com\github\cdktaverna\cdk-activity\0.6\cdk-activity-0.6.pom
> com.sun.org.apache.xerces.internal.impl.io.MalformedByteSequenceException: 
> Invalid byte 2 of 3-byte UTF-8 sequence.
>        at 
> com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.invalidByte(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.read(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.load(Unknown Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.scanContent(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl$FragmentContentDriver.next(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(Unknown 
> Source)
>        at javax.xml.parsers.DocumentBuilder.parse(Unknown Source)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:531)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:522)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.getPackageType(ArtifactImpl.java:269)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.act(LocalRepository.java:510)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.update(LocalRepository.java:490)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.addPlugin(PluginManager.java:225)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.initializePlugins(PluginManager.java:769)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.<init>(PluginManager.java:157)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.getInstance(PluginManager.java:168)
>        at 
> net.sf.taverna.raven.launcher.Launcher.findMainClass(Launcher.java:101)
>        at net.sf.taverna.raven.launcher.Launcher.launchMain(Launcher.java:130)
>        at net.sf.taverna.raven.launcher.Launcher.main(Launcher.java:64)
>        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>        at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>        at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>        at java.lang.reflect.Method.invoke(Unknown Source)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.runLauncher(PreLauncher.java:115)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.launchArgs(PreLauncher.java:69)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.main(PreLauncher.java:47)
> 10.12.2009 13:52:39 net.sf.taverna.raven.repository.impl.ArtifactImpl ?
> WARNUNG: IO error for 
> C:\Users\Gott\AppData\Roaming\taverna-2.0\repository\com\github\cdktaverna\cdk-activity\0.6\cdk-activity-0.6.pom
> com.sun.org.apache.xerces.internal.impl.io.MalformedByteSequenceException: 
> Invalid byte 2 of 3-byte UTF-8 sequence.
>        at 
> com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.invalidByte(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.read(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.load(Unknown Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.scanContent(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl$FragmentContentDriver.next(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(Unknown 
> Source)
>        at javax.xml.parsers.DocumentBuilder.parse(Unknown Source)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:531)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:522)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.getPackageType(ArtifactImpl.java:269)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.act(LocalRepository.java:510)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.update(LocalRepository.java:490)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.addPlugin(PluginManager.java:225)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.initializePlugins(PluginManager.java:769)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.<init>(PluginManager.java:157)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.getInstance(PluginManager.java:168)
>        at 
> net.sf.taverna.raven.launcher.Launcher.findMainClass(Launcher.java:101)
>        at net.sf.taverna.raven.launcher.Launcher.launchMain(Launcher.java:130)
>        at net.sf.taverna.raven.launcher.Launcher.main(Launcher.java:64)
>        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>        at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>        at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>        at java.lang.reflect.Method.invoke(Unknown Source)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.runLauncher(PreLauncher.java:115)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.launchArgs(PreLauncher.java:69)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.main(PreLauncher.java:47)
> 10.12.2009 13:52:39 net.sf.taverna.raven.repository.impl.ArtifactImpl ?
> WARNUNG: IO error for 
> C:\Users\Gott\AppData\Roaming\taverna-2.0\repository\com\github\cdktaverna\cdk-activity-ui\0.6\cdk-activity-ui-0.6.pom
> com.sun.org.apache.xerces.internal.impl.io.MalformedByteSequenceException: 
> Invalid byte 2 of 3-byte UTF-8 sequence.
>        at 
> com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.invalidByte(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.read(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.load(Unknown Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.scanContent(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl$FragmentContentDriver.next(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(Unknown 
> Source)
>        at javax.xml.parsers.DocumentBuilder.parse(Unknown Source)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:531)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:522)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.getPackageType(ArtifactImpl.java:269)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.act(LocalRepository.java:510)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.update(LocalRepository.java:490)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.addPlugin(PluginManager.java:225)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.initializePlugins(PluginManager.java:769)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.<init>(PluginManager.java:157)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.getInstance(PluginManager.java:168)
>        at 
> net.sf.taverna.raven.launcher.Launcher.findMainClass(Launcher.java:101)
>        at net.sf.taverna.raven.launcher.Launcher.launchMain(Launcher.java:130)
>        at net.sf.taverna.raven.launcher.Launcher.main(Launcher.java:64)
>        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>        at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>        at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>        at java.lang.reflect.Method.invoke(Unknown Source)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.runLauncher(PreLauncher.java:115)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.launchArgs(PreLauncher.java:69)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.main(PreLauncher.java:47)
> 10.12.2009 13:52:39 net.sf.taverna.raven.repository.impl.ArtifactImpl ?
> WARNUNG: IO error for 
> C:\Users\Gott\AppData\Roaming\taverna-2.0\repository\com\github\cdktaverna\cdk-activity-ui\0.6\cdk-activity-ui-0.6.pom
> com.sun.org.apache.xerces.internal.impl.io.MalformedByteSequenceException: 
> Invalid byte 2 of 3-byte UTF-8 sequence.
>        at 
> com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.invalidByte(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.read(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.load(Unknown Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.scanContent(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl$FragmentContentDriver.next(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(Unknown 
> Source)
>        at javax.xml.parsers.DocumentBuilder.parse(Unknown Source)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:531)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:522)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.getPackageType(ArtifactImpl.java:269)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.act(LocalRepository.java:510)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.update(LocalRepository.java:490)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.addPlugin(PluginManager.java:225)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.initializePlugins(PluginManager.java:769)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.<init>(PluginManager.java:157)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.getInstance(PluginManager.java:168)
>        at 
> net.sf.taverna.raven.launcher.Launcher.findMainClass(Launcher.java:101)
>        at net.sf.taverna.raven.launcher.Launcher.launchMain(Launcher.java:130)
>        at net.sf.taverna.raven.launcher.Launcher.main(Launcher.java:64)
>        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>        at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>        at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>        at java.lang.reflect.Method.invoke(Unknown Source)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.runLauncher(PreLauncher.java:115)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.launchArgs(PreLauncher.java:69)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.main(PreLauncher.java:47)
> 10.12.2009 13:52:39 net.sf.taverna.raven.plugins.PluginManager ?
> SCHWERWIEGEND: Saved invalid XML to 
> C:\Users\Gott\AppData\Roaming\taverna-2.0\plugins\plugins.xml
> 10.12.2009 13:52:39 net.sf.taverna.raven.plugins.PluginManager ?
> WARNUNG: Plugin net.sf.taverna.t2.credential-manager:credential-manager v.0.4 
> depends on unknown plugin Plugin net.sf.taverna.t2.workbench v0.4 (by 
> taverna.sf.net)
> 10.12.2009 13:52:39 net.sf.taverna.raven.plugins.PluginManager ?
> SCHWERWIEGEND: Saved invalid XML to 
> C:\Users\Gott\AppData\Roaming\taverna-2.0\plugins\plugins.xml
> 10.12.2009 13:52:39 net.sf.taverna.raven.repository.impl.ArtifactImpl ?
> WARNUNG: IO error for 
> C:\Users\Gott\AppData\Roaming\taverna-2.0\repository\net\sf\taverna\t2\workbench\loop-ui\0.2\loop-ui-0.2.pom
> com.sun.org.apache.xerces.internal.impl.io.MalformedByteSequenceException: 
> Invalid byte 2 of 3-byte UTF-8 sequence.
>        at 
> com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.invalidByte(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.read(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.load(Unknown Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.scanContent(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl$FragmentContentDriver.next(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(Unknown 
> Source)
>        at javax.xml.parsers.DocumentBuilder.parse(Unknown Source)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:531)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:522)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.getPackageType(ArtifactImpl.java:269)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.act(LocalRepository.java:510)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.update(LocalRepository.java:490)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.addPlugin(PluginManager.java:225)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.initializePlugins(PluginManager.java:769)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.<init>(PluginManager.java:157)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.getInstance(PluginManager.java:168)
>        at 
> net.sf.taverna.raven.launcher.Launcher.findMainClass(Launcher.java:101)
>        at net.sf.taverna.raven.launcher.Launcher.launchMain(Launcher.java:130)
>        at net.sf.taverna.raven.launcher.Launcher.main(Launcher.java:64)
>        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>        at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>        at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>        at java.lang.reflect.Method.invoke(Unknown Source)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.runLauncher(PreLauncher.java:115)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.launchArgs(PreLauncher.java:69)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.main(PreLauncher.java:47)
> 10.12.2009 13:52:39 net.sf.taverna.raven.repository.impl.ArtifactImpl ?
> WARNUNG: IO error for 
> C:\Users\Gott\AppData\Roaming\taverna-2.0\repository\net\sf\taverna\t2\workbench\loop-ui\0.2\loop-ui-0.2.pom
> com.sun.org.apache.xerces.internal.impl.io.MalformedByteSequenceException: 
> Invalid byte 2 of 3-byte UTF-8 sequence.
>        at 
> com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.invalidByte(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.impl.io.UTF8Reader.read(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.load(Unknown Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLEntityScanner.scanContent(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl$FragmentContentDriver.next(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown
>  Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(Unknown 
> Source)
>        at com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(Unknown 
> Source)
>        at 
> com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(Unknown 
> Source)
>        at javax.xml.parsers.DocumentBuilder.parse(Unknown Source)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:531)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.readXML(ArtifactImpl.java:522)
>        at 
> net.sf.taverna.raven.repository.impl.ArtifactImpl.getPackageType(ArtifactImpl.java:269)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.act(LocalRepository.java:510)
>        at 
> net.sf.taverna.raven.repository.impl.LocalRepository.update(LocalRepository.java:490)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.addPlugin(PluginManager.java:225)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.initializePlugins(PluginManager.java:769)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.<init>(PluginManager.java:157)
>        at 
> net.sf.taverna.raven.plugins.PluginManager.getInstance(PluginManager.java:168)
>        at 
> net.sf.taverna.raven.launcher.Launcher.findMainClass(Launcher.java:101)
>        at net.sf.taverna.raven.launcher.Launcher.launchMain(Launcher.java:130)
>        at net.sf.taverna.raven.launcher.Launcher.main(Launcher.java:64)
>        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>        at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>        at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>        at java.lang.reflect.Method.invoke(Unknown Source)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.runLauncher(PreLauncher.java:115)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.launchArgs(PreLauncher.java:69)
>        at 
> net.sf.taverna.raven.prelauncher.PreLauncher.main(PreLauncher.java:47)
> 10.12.2009 13:52:40 net.sf.taverna.raven.plugins.PluginManager ?
> SCHWERWIEGEND: Saved invalid XML to 
> C:\Users\Gott\AppData\Roaming\taverna-2.0\plugins\plugins.xml
> 10.12.2009 13:52:40 net.sf.taverna.raven.plugins.PluginManager ?
> SCHWERWIEGEND: Saved invalid XML to 
> C:\Users\Gott\AppData\Roaming\taverna-2.0\plugins\plugins.xml
> 10.12.2009 13:52:40 net.sf.taverna.raven.plugins.PluginManager ?
> SCHWERWIEGEND: Saved invalid XML to 
> C:\Users\Gott\AppData\Roaming\taverna-2.0\plugins\plugins.xml
> INFO  2009-12-10 13:52:43,818 
> (net.sf.taverna.t2.workbench.ui.impl.Workbench:234) - Using 
> com.sun.java.swing.plaf.windows.WindowsLookAndFeel Look and Feel
> INFO  2009-12-10 13:52:46,104 
> (net.sf.taverna.t2.activities.wsdl.query.WSDLQuery:51) - About to parse 
> wsdl:http://www.ebi.ac.uk/xembl/XEMBL.wsdl
> INFO  2009-12-10 13:52:46,104 
> (net.sf.taverna.t2.activities.wsdl.query.WSDLQuery:51) - About to parse 
> wsdl:http://soap.genome.jp/KEGG.wsdl
> INFO  2009-12-10 13:52:46,104 
> (net.sf.taverna.t2.activities.wsdl.query.WSDLQuery:51) - About to parse 
> wsdl:http://soap.bind.ca/wsdl/bind.wsdl
> INFO  2009-12-10 13:52:46,104 
> (net.sf.taverna.t2.activities.wsdl.query.WSDLQuery:51) - About to parse 
> wsdl:http://www.ebi.ac.uk/ws/services/urn:Dbfetch?wsdl
> INFO  2009-12-10 13:52:46,104 
> (net.sf.taverna.t2.activities.wsdl.query.WSDLQuery:51) - About to parse 
> wsdl:http://eutils.ncbi.nlm.nih.gov/entrez/eutils/soap/eutils.wsdl
> WARN  2009-12-10 13:52:46,931 (org.apache.axis.utils.JavaUtils:1308) - Unable 
> to find required classes (javax.activation.DataHandler and 
> javax.mail.internet.MimeMultipart). Atta
> chment support is disabled.
> WARN  2009-12-10 13:52:47,227 
> (net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl:354) - No sub components 
> found for section http://taverna.sf.net/2008/t2workbench/menu#graphSaveMen
> uSection
> WARN  2009-12-10 13:52:47,352 
> (net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl:359) - Separator found within 
> section
> WARN  2009-12-10 13:52:47,352 
> (net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl:359) - Separator found within 
> section
> WARN  2009-12-10 13:52:47,367 
> (net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl:359) - Separator found within 
> section
> INFO  2009-12-10 13:52:47,648 
> (net.sf.taverna.t2.activities.wsdl.query.WSDLQuery:98) - Finished parsing 
> WSDL:http://www.ebi.ac.uk/ws/services/urn:Dbfetch?wsdl
> INFO  2009-12-10 13:52:47,664 
> (net.sf.taverna.t2.activities.wsdl.query.WSDLQuery:98) - Finished parsing 
> WSDL:http://www.ebi.ac.uk/xembl/XEMBL.wsdl
> INFO  2009-12-10 13:52:47,679 
> (net.sf.taverna.t2.activities.wsdl.query.WSDLQuery:98) - Finished parsing 
> WSDL:http://soap.bind.ca/wsdl/bind.wsdl
> INFO  2009-12-10 13:52:47,898 
> (net.sf.taverna.t2.workbench.models.graph.svg.SVGUtil:71) - Using XML parser 
> null
> INFO  2009-12-10 13:52:50,066 
> (net.sf.taverna.t2.activities.wsdl.query.WSDLQuery:98) - Finished parsing 
> WSDL:http://soap.genome.jp/KEGG.wsdl
> INFO  2009-12-10 13:53:33,404 
> (net.sf.taverna.t2.activities.wsdl.query.WSDLQuery:98) - Finished parsing 
> WSDL:http://eutils.ncbi.nlm.nih.gov/entrez/eutils/soap/eutils.wsdl
>
>
> --
> GRATIS für alle GMX-Mitglieder: Die maxdome Movie-FLAT!
> Jetzt freischalten unter http://portal.gmx.net/de/go/maxdome01
>
> ------------------------------------------------------------------------------
> Return on Information:
> Google Enterprise Search pays you back
> Get the facts.
> http://p.sf.net/sfu/google-dev2dev
> _______________________________________________
> taverna-hackers mailing list
> [email protected]
> Web site: http://www.taverna.org.uk
> Mailing lists: http://www.taverna.org.uk/taverna-mailing-lists/
> Developers Guide: http://www.mygrid.org.uk/tools/developer-information
>



-- 
Stian Soiland-Reyes, myGrid team
School of Computer Science
The University of Manchester

------------------------------------------------------------------------------
Return on Information:
Google Enterprise Search pays you back
Get the facts.
http://p.sf.net/sfu/google-dev2dev
_______________________________________________
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Web site: http://www.taverna.org.uk
Mailing lists: http://www.taverna.org.uk/taverna-mailing-lists/
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