Hi, If I may suggest - could you register this service into the BioCatalogue (assuming it's a SOAP or REST service)?
http://www.biocatalogue.org/ This way you can document and advertise the service :-) You can describe the usage conditions, contact info, and so on easily. You can submit services from here: http://www.biocatalogue.org/services/new Let me know if I can assist in any way. Cheers, Jits Pieter Neerincx wrote: > Hi Steffen, > > If by "private dutch server" you mean the one from > www.bioinformatics.nl, it's a public one :), but it's not well > documented nor advertised. > > There is a user and a password string you have to supply in the input, > but that is just to make sure the one downloading the results is the > same as the one who submitted the job. The service runs over https > with a self-signed certificate, which is a bit of a hassle to setup, > but you only have to do that once per server. Instructions are > available here: > > https://www.bioinformatics.nl/phenolink/home/ > > Make sure not to skip the "Java and HTTPS manual" part. There is > currently human, rat, mouse and some farm animals. More info is > available in the serviceNotes if you execute the > [name_of_the_service]_help service with an empty input. In case you > plan to submit a lot of jobs you might want to use > dev.bioinformatics.nl instead. It currently runs exactly the same > version as the production server, but your jobs will less easily cause > a high load and hence you will less easily run into a brick wall :). > There is BLAST (async) and BLAT (sync), but no SSAHA. If you have any > questions let me know... > > Cheers, > > Pi > > > On 21•Aug•2009, at 4:35 PM, Steffen Moeller wrote: > > >> Hello, >> >> myExperiment shows some nice workflows for a private dutch server, but >> is there a public server anywhere that allows SSAHA or BLAST runs >> agains >> rodent genomes? The EBI's web services allow similarity searches only >> against their EMBL database, but not against Ensembl, from how I read >> their database list. >> >> Many thanks in advance >> >> Steffen >> >> ------------------------------------------------------------------------------ >> Let Crystal Reports handle the reporting - Free Crystal Reports 2008 >> 30-Day >> trial. Simplify your report design, integration and deployment - and >> focus on >> what you do best, core application coding. Discover what's new with >> Crystal Reports now. http://p.sf.net/sfu/bobj-july >> _______________________________________________ >> taverna-users mailing list >> [email protected] >> [email protected] >> Web site: http://www.taverna.org.uk >> Mailing lists: http://www.taverna.org.uk/taverna-mailing-lists/ >> > > ------------------------------------------------------------- > Biomolecular Mass Spectrometry and Proteomics > Utrecht University > > Visiting address: > H.R. Kruyt building room O607 > Padualaan 8 > 3584 CH Utrecht > The Netherlands > > Mail address: > P.O. box 80.082 > 3508 TB Utrecht > The Netherlands > > phone: +31 (0)6-143 66 783 > email: [email protected] > skype: pieter.online > ------------------------------------------------------------ > > > ------------------------------------------------------------------------------ > Let Crystal Reports handle the reporting - Free Crystal Reports 2008 30-Day > trial. Simplify your report design, integration and deployment - and focus on > what you do best, core application coding. Discover what's new with > Crystal Reports now. http://p.sf.net/sfu/bobj-july > _______________________________________________ > taverna-users mailing list > [email protected] > [email protected] > Web site: http://www.taverna.org.uk > Mailing lists: http://www.taverna.org.uk/taverna-mailing-lists/ > ------------------------------------------------------------------------------ Let Crystal Reports handle the reporting - Free Crystal Reports 2008 30-Day trial. Simplify your report design, integration and deployment - and focus on what you do best, core application coding. Discover what's new with Crystal Reports now. http://p.sf.net/sfu/bobj-july _______________________________________________ taverna-users mailing list [email protected] [email protected] Web site: http://www.taverna.org.uk Mailing lists: http://www.taverna.org.uk/taverna-mailing-lists/
