Hi,
I guess I really should just use the Taverna that works OK (on the XP),
but my scientific curiosity is getting the better of me.So....
My Java seems OK on all machine
No proxy config needed on the network
XP, Vista and Win7 "home" repository folders are identical
However; running Taverna debug gives the following:
On the working (XP) system: no messages.
On both the Vista and XP machines the following messages:
06-Oct-2010 07:55:17 net.sf.taverna.raven.repository.impl.LocalRepository ?
WARNING: Could not find artifact org.openscience:cdk:svn-20080826
net.sf.taverna.raven.repository.ArtifactNotFoundException: Can't find
artifact f
or: org.openscience:cdk:svn-20080826
at
net.sf.taverna.raven.repository.impl.LocalRepository.fetch(LocalRepos
itory.java:819)
at
net.sf.taverna.raven.repository.impl.LocalRepository.act(LocalReposit
ory.java:543)
at
net.sf.taverna.raven.repository.impl.LocalRepository.update(LocalRepo
sitory.java:490)
at net.sf.taverna.raven.Loader.doRavenMagic(Loader.java:170)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at
net.sf.taverna.tools.Bootstrap.createWorkbenchClass(Bootstrap.java:24
0)
at net.sf.taverna.tools.Bootstrap.main(Bootstrap.java:71)
WARN 2010-10-06 07:55:33,523 Unable to find required classes
(javax.activation.
DataHandler and javax.mail.internet.MimeMultipart). Attachment support
is disabl
ed.
Nick
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On 04/10/2010 11:50, Stian Soiland-Reyes wrote:
> On Sat, Oct 2, 2010 at 08:20, Nick Price<[email protected]>
> wrote:
>> Interesting; I realise where they should be because Egon says so in his
>> installation intructions, but they don't appear in mine nor, as reported
>> in my last post, in my Windows 7 box. There clearly must be something
>> about my Windows setups that's causing this problem.
>
> I just tried on Windows 7/x64 with Java 1.6.0_19 64-bit and 1.6.0_21
> 64-bit, and CDK installed and appeared in Taverna 1.7.2 when using the
> plugin site http://cdk-taverna.de/plugin/
>
> It seems to work with:
>
> "C:\Program Files\Java\jre6\bin\java.exe"
> "C:\Program Files\Java\jdk1.6.0_19\bin\java.exe"
> "C:\Program Files (x86)\Java\jdk1.6.0_19\bin\java.exe"
> "C:\Program Files (x86)\Java\jre6\bin\java.exe"
>
>
> Could you check your Taverna *home* directory? On Windows 7 this
> should be C:\Users\USERNAME\AppData\Roaming\Taverna-1.7.2
>
> After installation of the CDK plugin (and no other plugins) the
> repository/ folder in the home folder should be 4.63 MB - you can try
> deleting the folders 'repository' and 'plugins' and try to install the
> CDK plugin again?
>
>
> Could it be that your network requires a proxy configuration? That
> could cause problems for download of plugins, but should be caught at
> plugin installation time. As CDK Taverna does run their Maven
> repository on the official port 80, it should not be blocked by
> firewalls, we've seen cases where repositories on say :8080 could be
> blocked.
>
>
> Could you try to copy over the repository/ and plugins/ folder of the
> user folder (C:\Local users\...) from the XP machine where everything
> works, and put it into the Windows 7 machine?
>
>
>
> A good tip is to try to run taverna-debug.bat to check for any error
> traces. A successful startup after installing the CDK plugin should
> give minimal traces:
>
> C:\Program Files (x86)\Taverna Workbench 1.7.2>taverna-debug
> WARN 2010-10-04 11:23:01,081 Unable to find required classes
> (javax.activation.
> DataHandler and javax.mail.internet.MimeMultipart). Attachment support is
> disabl
> ed.
>
> C:\Program Files (x86)\Taverna Workbench 1.7.2>
>
>
>
> but if I install the plugin while not logged in to our WiFi (which
> instead gives a silly HTML login page to any URL) I get:
>
> [Fatal Error] :1:1: Premature end of file.
> 04-Oct-2010 11:16:16 net.sf.taverna.raven.repository.impl.ArtifactImpl ?
> WARNING: XML SAX error for
> C:\Users\stain\AppData\Roaming\Taverna-1.7.2\reposito
> ry\org\openscience\cdk\applications\taverna\cdk-taverna\0.5.1.1\cdk-taverna-0.5.
> 1.1.pom
> org.xml.sax.SAXParseException: Premature end of file.
> at
> com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(Unknown So
> urce)
> at
> com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(Unk
> nown Source)
>
> If this has happened you need to clear the repository/ and plugin/
> folders and install the CDK plugin again, as an invalid download of
> say the cdk-taverna-0.5.1.1.pom file is stored in your Taverna home
> directory.
>
> Note that due to a bug in Taverna 1 merely deleting the repository/
> folder will not necessarily force a re-download from the plugin site,
> as plugins are loaded in arbitrary order, so you need to also delete
> plugins/plugins.xml to install the plugin again.
>
>
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