Hi guys,

So I started implementing a full example using Robb's description of U-Net 
as well as the Dental Challenge dataset they competed against. You can see 
my ipython notebook here 
<http://nbviewer.jupyter.org/gist/mongoose54/d88da59c24d452bef002436156051fba>. 
The issue I am facing is that my predicted images are grayscale (e.g. 
having normalized pixel values 0-1). I thought that using the mean or 
argmax I would get the predicted masks. Unfortunately as you can in the 
notebook the histogram of the predicted images is not bi-modal. I am 
wondering if I am using the wrong loss function (i.e. categorical cross 
entropy) to optimize on and I should use some other function. Let me know 
of your thoughts.

Thanks,
Alex

On Tuesday, July 19, 2016 at 1:27:06 PM UTC-7, [email protected] 
wrote:
>
> Yes, I'll install Ubuntu and try your code under Linux. The only library I 
> found to stably work under Windows is Matlab parallel computing toolbox: 
> there is an example of a classical CNN but I guess it is not flexible 
> enough to build something similar to u-net. Also I do not know how 
> efficient it is and would prefer to start with a library with large 
> community.
>

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