So DISQUS offers a way to use in single page apps: 
https://help.disqus.com/customer/portal/articles/472107

Seems to me the best approach is to have a coments tab on the sidebar and 
as the user scrolls to a tiddler it executes the  DISQUS.reset function and 
sets the page identifier to that tiddler.

On Saturday, June 20, 2015 at 12:24:19 PM UTC-4, Jed Carty wrote:
>
> In the hangout Jeremy pointed out that I should probably let people know 
> about what I got to work with other commenting systems on tiddlywiki, so 
> here is my progress for putting DISQUS and IntenseDebate into a tiddlywiki. 
> Nether of these require access to a server so they work on tiddlyspot.The 
> same applies to the muut comments 
> <https://groups.google.com/forum/#!topic/tiddlywiki/jkif0vodmNY> I showed 
> before.
>
> DISQUS comments
>
> There are two problems with using DISQUS in a tiddlywiki:
>
> 1)You can only have one comment thread per page because the script used 
> contains the comment thread id and there is no way that I have found to use 
> two scripts (they have the same function names).
> 2)There is the same problem as with the muut comments where the tiddler 
> with the comment thread needs to be open when the wiki is loaded for the 
> comments to be displayed (or the wiki needs to be reloaded with the 
> permalink to the tiddler).
>
> Aside from those problems the comments work as expected. Here is a site 
> showing the how it works with instructions 
> <http://ooktech.com/jed/ExampleWikis/DISQUS%20Demo/>.
>
> IntenseDebate Comments:
>
> This one is cheating because everything is put into a tiddler tagged with 
> $:/tags/RawMarkup, but it is a way to get comments on a tiddlywiki without 
> needing access to a server.
>
> This one also has problems:
>
> 1)You can't put the comments inside a tiddler, so they are always at the 
> very bottom of the wiki and you can't use wikitext to change anything about 
> them.
> 2)You can only have one comment thread per wiki for the same reason as 
> DISQUS, the thread id is in the script and I haven't found a way to change 
> this.
>
> This one doesn't ever require a reload. There is a demo with instructions 
> here <http://ooktech.com/jed/ExampleWikis/IntenseDebate%20Demo/>.
>
> So, in summary:
>
> muut comments allow you to put different comment threads in different 
> tiddlers, but have some problems loading. Other than the loading problems 
> it works as expected.
> DISQUS only allows one thread per wiki (actually per html file, but it has 
> the same effect). DISQUS requires a reload when opening a tiddler with the 
> comments, but reloading works better than with muut.
> IntenseDebate doesn't require a reload but it also can only have one 
> comment thread per wiki. Also I cheated for this one and just put the raw 
> html into the wiki so the comments are always at the bottom of the page and 
> can't be affected using wikitext.
>
> None of them require access to a server and all of them are simple to set 
> up.
>

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