Sqlite 3.4.1 is almost 3 years old. There have been quite a few major
corruption bugs fixed since then. If you want to ask about manual sqlite
file munging, you would have to talk to the sqlite project.

--Noah

> -----Original Message-----
> From: [email protected] [mailto:[email protected]]
> On Behalf Of Rutger Hofman
> Sent: Friday, April 09, 2010 10:36 AM
> To: [email protected]
> Subject: [Trac] 'DatabaseError: database disk image is malformed'
> 
> I am running 3 trac instances on a FreeBSD server; trac 0.11b, sqlite3
> 3.4.1, pysqlite-2.3.5. More or less simultaneously (at least within a
> few days) all three trac databases got corrupted. You can check for
> yourself at e.g. http://trac.rfidguardian.org:8000/trac-0-11b, it shows
> a python stack trace with at bottom a database disk image is malformed.
> 
> When I have a look at one of the sqlite3 databases, the header block is
> obviously corrupted:
> 
> 000  53 51 4C 69 74 65 20 66 6F 72 6D 61 74 20 33 00 SQLite format 3.
> 010  04 00 01 01 00 40 20 20 00 01 D5 6D 00 00 00 00 .....@  ...m....
> 020  00 00 24 AA 00 00 04 9A 38 32 2E 39 35 2E 31 35 ..$.....82.95.15
> 030  37 2E 32 31 20 2D 20 2D 20 5B 30 36 2F 41 70 72 7.21 - - [06/Apr
> 040  2F 32 30 31 30 20 31 34 3A 33 30 3A 31 30 5D 20 /2010 14:30:10]
> 050  22 47 45 54 20 2F 74 72 61 63 2D 30 2D 31 31 62 "GET /trac-0-11b
> 060  20 48 54 54 50 2F 31 2E 31 22 20 35 30 30 20 2D  HTTP/1.1" 500 -
> 070  0A 74 72 75 6E 6B 2F 73 72 63 2F 75 69 2F 73 74 .trunk/src/ui/st
> 080  64 69 6E 20 48 54 54 50 2F 31 2E 31 22 20 35 30 din HTTP/1.1" 50
> 090  30 20 2D 0A 39 39 34 20 48 54 54 50 2F 31 2E 31 0 -.994 HTTP/1.1
> 0A0  22 20 35 30 30 20 2D 0A 2E 30 22 20 35 30 30 20 " 500 -..0" 500
> 0B0  2D 0A 20 35 30 30 20 2D 0A 54 50 2F 31 2E 30 22 -. 500 -.TP/1.0"
> 0C0  20 35 30 30 20 2D 0A 22 20 35 30 30 20 2D 0A 50  500 -." 500 -.P
> 0D0  2F 31 2E 31 22 20 35 30 30 20 2D 0A 31 2E 30 22 /1.1" 500 -.1.0"
> 0E0  20 35 30 30 20 2D 0A 30 30 39 2D 30 37 2D 32 34  500 -.009-07-24
> 0F0  54 32 30 25 33 41 35 30 25 33 41 35 35 5A 25 32 T20%3A50%3A55Z%2
> 
> E.g. bytes 0x01c..0x01f should give the database size in 1K pages; that
> should be 14080000 / 1024 = 13750 = 0x000035b6. It is 0x000000. And
> other fields are as obviously broken.
> 
> What can be the cause of this simultaneous corruption? Is there a way
> to
> recover the database?
> 
> Alas, we had a misunderstanding w/ our web host on backup policy; he
> turns out to keep multiple versions of the current files, but no
> rollback...
> 
> Thanks,
> 
> Rutger Hofman
> VU Amsterdam
> http://www.rfidguardian.org
> 
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