Yes, thank you for the info - much appreciated.

So the workaround is:

1) Install "fromdos". E.g. in Ubuntu 10.04, sudo aptitude install tofrodos
2) Convert the files: fromdos file1.txt && fromdos file2.txt
3) Re-do the meld: meld file1.txt file2.txt

> Step one would be discovering whether this is a Meld or Python difflib
issue.

I would guess the issue is with Python difflib because I tried
installing a few older versions of meld (which used to work before I
upgraded to Ubuntu 10.04) and the problem still occurred.

-- 
meld regression - now inaccurately highlights file differences
https://bugs.launchpad.net/bugs/578121
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