Your first steps failed because you were not root, and files could not be created/updated.
When you say: "" 4. I have looked in /usr/share/biomaj/bin/biomaj.sh and saw the line: java -Xmx1024m -jar $BIOMAJ_ROOT/lib/biomaj.jar $@I went there and execute bimaj.jar directly on terminal as sudoer and got the result: java -Xmx1024m -jar biomaj.jar The file [null/general.conf] does not exist! "" you do not load the env.sh file which sets the environement. Here, the BIOMAJ_ROOT env variable is not set, but the application need it. This is the reason why the file is not correctly created. IF env.sh had been loaded via the biomaj command (executed as root/sudoer), the command would have worked. I gonna add however in the man page that program must be executed as root/sudoer. -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/915316 Title: biomaj1.2.0-3 is not startable on Ubuntu12.04 - biomaj.jar is owned by root To manage notifications about this bug go to: https://bugs.launchpad.net/ubuntu/+source/biomaj/+bug/915316/+subscriptions -- ubuntu-bugs mailing list [email protected] https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
