I have this problem to.

WORKAROUND:

Download zabbix-2.0.9 source from their website and replace the contents
of zabbix-2.0.9/frontend/php/ into /usr/share/zabbix/ (rename the old
zabbix to zabbixold).  Then log into the web interface.  It will have
you go through all the config again, it will generate a zabbix.conf.php
file for you to copy into this directiory, but once a connection is
established to the databse it should restore your frontend without the
error.

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https://bugs.launchpad.net/bugs/1239782

Title:
  Zabbix 2.0.6 PHP mysql_connect() deprecated warning

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