As far as I can tell, 
sed 's/\r$//' checksums.md5 | sed 's/\r/\n'/ | md5sum -c
works exactly as expected. If I knew where to find the source for this, I'm so 
annoyed I might try to decipher it. I'm not very good, but it seems like it 
would translate.

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  md5sum can't read md5 files with CRLF line terminators

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