Waiting for the updates to finish is there by design to not break
systems. Latest unattended-upgrades (0.99 and up) perform the updates in
small package sets and shutdown can gracefully stop the update process
when - between installing the small package sets - the is in consistent
state.
In case a single package update such as mysql's takes very long time in
itself the shutdown process should wait for it but I suspect in your
case there were several other updates queued and performed together.
** Changed in: unattended-upgrades (Ubuntu)
Status: New => Fix Released
** Changed in: unattended-upgrades (Ubuntu)
Status: Fix Released => Won't Fix
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https://bugs.launchpad.net/bugs/1766797
Title:
'Shutdown' does not shutdown the computer immediately
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