Dear Marshall, Thank you for your research, I appreciate it. I ended up removing references to the missing files from the source code and I got it to compile.Best wishes, Ahmed
On Wed, Jun 11, 2008 at 6:09 PM, Marshall Schor <[EMAIL PROTECTED]> wrote: > Ahmed Abdeen(Home) wrote: > >> Hi Marshall,I actually sent my question there and I was told that those >> files aren't there's to begin with. I was advised to check with uima-users >> after I posted my question to the uima-developers list. >> >> > I think you would get these files from the universities mentioned. For > instance, for some of the missing files below, they have names like > Standford Parser, and there is a parser available for download from > http://nlp.stanford.edu/software/lex-parser.shtml which might be that > parser. > -Marshall > > Thanks for your response anyways! >> Ahmed >> >> On Wed, Jun 11, 2008 at 3:23 PM, Marshall Schor <[EMAIL PROTECTED]> wrote: >> >> >> >>> Hello, Ahmed - >>> >>> I think this question is best directed to the bioNLP group. >>> It looks like the build script is not finding many different classes. >>> Perhaps there is a "readme" in the distribution you got which gives >>> instructions on obtaining other Jars from places like Stanford (the >>> import >>> of "edu.stanford.nlp. . ." implies this may be coming from Standford >>> university). >>> >>> -Marshall >>> >>> >>> Ahmed Abdeen(Home) wrote: >>> >>> >>> >>>> Apologies from cross-listing! >>>> >>>> Hello,I am trying to compile bioNLP UIMA tools but I am getting the >>>> following errors: >>>> Buildfile: build.xml >>>> >>>> compile: >>>> [javac] Compiling 161 source files to >>>> >>>> >>>> /Users/ahmedabdeenhamed/Projects/bionlp_uima_repository-1.0.1/build/classes >>>> [javac] >>>> >>>> >>>> /Users/ahmedabdeenhamed/Projects/bionlp_uima_repository-1.0.1/src/edu/uchsc/ccp/util/external/stanfordparser/StanfordParser_Util.java:48: >>>> cannot find symbol >>>> [javac] symbol : class TypedDependencyList >>>> [javac] location: package edu.stanford.nlp.trees >>>> [javac] import edu.stanford.nlp.trees.TypedDependencyList; >>>> [javac] ^ >>>> [javac] >>>> >>>> >>>> /Users/ahmedabdeenhamed/Projects/bionlp_uima_repository-1.0.1/src/edu/uchsc/ccp/util/external/stanfordparser/StanfordParser_Util.java:418: >>>> cannot find symbol >>>> [javac] symbol : class TypedDependencyList >>>> [javac] location: class >>>> edu.uchsc.ccp.util.external.stanfordparser.StanfordParser_Util >>>> [javac] TypedDependencyList tdl = gs.typedDependencies(); >>>> [javac] ^ >>>> [javac] >>>> >>>> >>>> /Users/ahmedabdeenhamed/Projects/bionlp_uima_repository-1.0.1/src/edu/uchsc/ccp/util/external/penn/PennBioTokenizer_Util.java:49: >>>> cannot find symbol >>>> [javac] symbol : constructor BioTokenizer(java.lang.String) >>>> [javac] location: class edu.upenn.cis.tokenizers.BioTokenizer >>>> [javac] bt = new BioTokenizer(tokenizerModelFile); >>>> [javac] ^ >>>> [javac] Note: Some input files use or override a deprecated API. >>>> [javac] Note: Recompile with -Xlint:deprecation for details. >>>> [javac] Note: Some input files use unchecked or unsafe operations. >>>> [javac] Note: Recompile with -Xlint:unchecked for details. >>>> [javac] 3 errors >>>> >>>> BUILD FAILED >>>> >>>> If you have had experience with bioNLP UIMA and got it to compile, >>>> please >>>> let me know. I could use some help. >>>> Thanks in advance! >>>> Ahmed >>>> >>>> >>>> >>>> >>>> >>> >>> >> >> >> > >
