Dave, There was a related email one [1]. Essentially, you shouldn't need a secondary/redundant lookup window and dictionary. It should just iterate through all of the Medications previously identified by the Dictionary Lookup Component. See sample config [2] in how to add that to your existing pipeline. Let us know if that works for you.
[1] http://mail-archives.apache.org/mod_mbox/ctakes-dev/201412.mbox/%3c924de05c19409b438eb81de683a942d916db2...@chexmbx1a.chboston.org%3e [2] https://svn.apache.org/repos/asf/ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextFastUMLSProcessor.xml On Fri, Dec 26, 2014 at 10:47 PM, David Kincaid <[email protected]> wrote: > Is the ctakes-drug-ner AE supposed to be working in the newest versions of > cTakes (3.2.x)? I'm getting the following error and confirm that that > TypeSystem.xml doesn't exist anywhere. > > Has ctakes-drug-ner been supersceded by something else? > > > InvalidXMLException An import could not be resolved. No .xml file with > name "org.apache.ctakes.drugner.types.TypeSystem" was found in the class > path or data path. (Descriptor: > file:/home/davek/apps/apache-ctakes-3.2.1/desc/ctakes-drug-ner/desc/analysis_engine/DrugCNP2LookupWindow.xml) > > > Thanks, > > Dave >
