Forwarding the reply to the biomart list, it may be helpful for other users.
------ Forwarded Message From: jzhang <[email protected]> Date: Wed, 9 Feb 2011 09:14:21 -0500 To: Syed Haider <[email protected]> Cc: <[email protected]>, Arek Kasprzyk <[email protected]> Subject: Re: [BioMart Users] fail to retrieve sample report ICGC mart This problem was the same as I was trying to explain yesterday. Url to sample report needs a correct dataset name that is prepared in other view, hence the sample dataset name is kept in other marts partition table and it has to be matched properly. Short solution is to allow users edit this partition column. When 'master' partition table is in place this problem will be solved at software level, no user needs to be involved. Junjun ----- Original Message ----- From: Syed Haider Sent: Wednesday, February 09, 2011 09:08 AM To: Junjun Zhang Cc: '[email protected]' <[email protected]> Subject: Re: [BioMart Users] fail to retrieve sample report ICGC mart Jorge has already shared the logs with me locally On 09/02/2011 14:01, Junjun Zhang wrote: > Jorge, please remove password in the log before sending the log > > Junjun > > ----- Original Message ----- > From: Syed Haider [mailto:[email protected]] > Sent: Wednesday, February 09, 2011 07:10 AM > To: Jorge Zamora<[email protected]> > Cc: [email protected]<[email protected]> > Subject: Re: [BioMart Users] fail to retrieve sample report ICGC mart > > Same for this one too, log file please. > > thanks > Syed > > On 09/02/2011 10:25, Jorge Zamora wrote: >> Hello, >> >> I trying to get a sample report using my local mart under biomart 0.8 >> rc4 (ICGC), hoewer I never get to retrieve the report back. This how >> my url look like: >> >> http://localhost:9000/martreport/?report=sample_report&mart=sample_2&donor_id=3&; datasets=sample_no%20data >> >> >> any idea why I don't get the report back? (at least an empty one). >> >> Thanks, >> Jorge >> >> **NOTA DE CONFIDENCIALIDAD** Este correo electrónico, y en su caso los ficheros adjuntos, pueden contener información protegida para el uso exclusivo de su destinatario. Se prohíbe la distribución, reproducción o cualquier otro tipo de transmisión por parte de otra persona que no sea el destinatario. Si usted recibe por error este correo, se ruega comunicarlo al remitente y borrar el mensaje recibido. >> **CONFIDENTIALITY NOTICE** This email communication and any attachments may contain confidential and privileged information for the sole use of the designated recipient named above. Distribution, reproduction or any other use of this transmission by any party other than the intended recipient is prohibited. If you are not the intended recipient please contact the sender and delete all copies. >> >> _______________________________________________ >> Users mailing list >> [email protected] >> https://lists.biomart.org/mailman/listinfo/users > _______________________________________________ > Users mailing list > [email protected] > https://lists.biomart.org/mailman/listinfo/users ------ End of Forwarded Message _______________________________________________ Users mailing list [email protected] https://lists.biomart.org/mailman/listinfo/users
