Hi Junjun,
will you show us how to make that fix?
Thanks,
Jorge
Junjun Zhang wrote:
Forwarding the reply to the biomart list, it may be helpful for other users.
------ Forwarded Message
From: jzhang <[email protected]>
Date: Wed, 9 Feb 2011 09:14:21 -0500
To: Syed Haider <[email protected]>
Cc: <[email protected]>, Arek Kasprzyk <[email protected]>
Subject: Re: [BioMart Users] fail to retrieve sample report ICGC mart
This problem was the same as I was trying to explain yesterday. Url to
sample report needs a correct dataset name that is prepared in other view,
hence the sample dataset name is kept in other marts partition table and it
has to be matched properly.
Short solution is to allow users edit this partition column. When 'master'
partition table is in place this problem will be solved at software level,
no user needs to be involved.
Junjun
----- Original Message -----
From: Syed Haider
Sent: Wednesday, February 09, 2011 09:08 AM
To: Junjun Zhang
Cc: '[email protected]' <[email protected]>
Subject: Re: [BioMart Users] fail to retrieve sample report ICGC mart
Jorge has already shared the logs with me locally
On 09/02/2011 14:01, Junjun Zhang wrote:
Jorge, please remove password in the log before sending the log
Junjun
----- Original Message -----
From: Syed Haider [mailto:[email protected]]
Sent: Wednesday, February 09, 2011 07:10 AM
To: Jorge Zamora<[email protected]>
Cc: [email protected]<[email protected]>
Subject: Re: [BioMart Users] fail to retrieve sample report ICGC mart
Same for this one too, log file please.
thanks
Syed
On 09/02/2011 10:25, Jorge Zamora wrote:
Hello,
I trying to get a sample report using my local mart under biomart 0.8
rc4 (ICGC), hoewer I never get to retrieve the report back. This how
my url look like:
http://localhost:9000/martreport/?report=sample_report&mart=sample_2&donor_id=3&;
datasets=sample_no%20data
any idea why I don't get the report back? (at least an empty one).
Thanks,
Jorge
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