On 06/09/2011 02:33 PM, David Croft wrote:
Is there any kind of centralized point of distribution for alerts on
changes to the various BioMarts? We have been going to
http://www.biomart.org/biomart/martservice to get information about
ENSEMBL A.Thaliana and O.sativa genomes, but the location seems to have
changed - as far as I can work out, we now need to get this data from
http://plants.ensembl.org/biomart/martservice. We are also having
problems with Dictostelium and Plasmodium genomes, I guess they have
also moved to some more specialized location?
David,
I suspect the problem with Dicty and Plasmodium is due to the underlying
dataset name changing in the last release of Ensembl Protists adopt the
xyyyy_eg_gene dataset naming convention that applies to other divisions
of Ensembl Genomes.
Apologies for the problems this has caused - let me know if it helps.
Best,
Dan.
--
Dan Staines, PhD Ensembl Genomes Technical Coordinator
EMBL-EBI Tel: +44-(0)1223-492507
Wellcome Trust Genome Campus Fax: +44-(0)1223-494468
Cambridge CB10 1SD, UK http://www.ensemblgenomes.org/
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