Hi Uma,
few things you need to make sure if they are correct. try materialising
only gene dataset first ? Make sure both source schema and target mart
should be on same database server. Try generating only SQL first instead
of creating a mart directly, see if this works ?
Let me know how you get on with these options and which ones do work.
Best,
Syed
On 05/10/2011 14:23, Uma Maheswari wrote:
Hi Syed,
I tried adding just one core database and selected the main
tables(gene,transcript,translation) and when I try to materialise, I got
an error message "An error occurred while building mart (see logs for
more information)" but the log files in /dist/logs/ are empty. But in
this process we are not specify the biomart schema etc. Should a add
access points before materializing? In 0.7 we used a xml file to give
all the specifications.
thanks for the help
Uma
On 05/10/11 13:59, Syed Haider wrote:
Hi Uma,
Have you tried adding your new core database independently ? what
happens when you add the source schema and then materialise it into a
mart. this needs to work independently, first and foremost. Let me
know how you get on with this.
Best,
Syed
On 04/10/2011 16:34, Uma Maheswari wrote:
Hi All,
I am trying to create a registery file (0.8) for Ensembl_genomes mart. I
am able to import the 0.7 register and save it using
release-0_8-candidate_6 martconfigurator. I am able to see the two
(registry.xml and the .registry) new registry file. But I am not able to
open the saved file "0.8 registery file". I don't get any error
message, I am not sure if I am missing something,
Basically I am trying to add a new core database to the existing mart
using release-0_8-candidate_6/martconfigurator, which will be the
easiest way do.
Thanks for the help
Uma
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