I am usgin the martj 0.7 code from the user docs, using the igisMartRegistry.xml, and I get a:
org.ensembl.mart.lib.config.ConfigurationException: Caught SQL Exception during fetch of requested digest: You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'ensembl_mart_62.meta_conf__xml__dm mx WHERE md.dataset_id_key=mi.dataset_id_key ' at line 1 on the adaptor.getDatasetConfigByDatasetInternalName() method. the sql statement is SELECT interface, display_name, dataset, description, message_digest, type, visible, version,md.dataset_id_key, modified FROM ensembl_mart_62.meta_conf__interface__dm mi, ensembl_mart_62.meta_conf__dataset__main md ensembl_mart_62.meta_conf__xml__dm mx WHERE md.dataset_id_key=mi.dataset_id_key AND md.dataset_id_key=mx.dataset_id_key AND visible = 1 but it is missing a comma between the "md" and "ensembl_mart_62." Has anyone seen this?
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