Hi Jeremy, i am forwarding your email to the users mailing list. Rhoda and/or Steffen may want to comment on those
a On Wed, Nov 2, 2011 at 1:30 PM, Jeremy Leipzig <[email protected]> wrote: > Hi Arek, > Can you look into if these Ensembl transcript names are somehow > duplicated in Biomart? > > This is related to this Bioconductor question: > > http://biostar.stackexchange.com/questions/13819/bioconductor-problem-with-maketranscriptdbfrombiomart-genomicfeatures-package > > [1] "ENST00000244174" "ENST00000262640" "ENST00000285718" > "ENST00000286448" "ENST00000302805" "ENST00000313871" > [7] "ENST00000326153" "ENST00000331035" "ENST00000334060" > "ENST00000334651" "ENST00000340131" "ENST00000355432" > [13] "ENST00000355805" "ENST00000359512" "ENST00000361536" > "ENST00000369423" "ENST00000369437" "ENST00000381177" > [19] "ENST00000381180" "ENST00000381184" "ENST00000381187" > "ENST00000381192" "ENST00000381218" "ENST00000381222" > [25] "ENST00000381223" "ENST00000381229" "ENST00000381233" > "ENST00000381241" "ENST00000381261" "ENST00000381297" > [31] "ENST00000381317" "ENST00000381333" "ENST00000381401" > "ENST00000381469" "ENST00000381500" "ENST00000381507" > [37] "ENST00000381509" "ENST00000381524" "ENST00000381529" > "ENST00000381566" "ENST00000381567" "ENST00000381575" > [43] "ENST00000381578" "ENST00000381625" "ENST00000381657" > "ENST00000381663" "ENST00000390665" "ENST00000391707" > [49] "ENST00000399012" "ENST00000399966" "ENST00000400701" > "ENST00000400841" "ENST00000411342" "ENST00000412290" > [55] "ENST00000412516" "ENST00000412936" "ENST00000414513" > "ENST00000415337" "ENST00000416733" "ENST00000417535" > [61] "ENST00000419094" "ENST00000419737" "ENST00000420411" > "ENST00000420865" "ENST00000421233" "ENST00000422618" > [67] "ENST00000424344" "ENST00000425740" "ENST00000427886" > "ENST00000429181" "ENST00000430235" "ENST00000430536" > [73] "ENST00000430562" "ENST00000430923" "ENST00000431238" > "ENST00000431582" "ENST00000431919" "ENST00000432272" > [79] "ENST00000432318" "ENST00000432523" "ENST00000432757" > "ENST00000434938" "ENST00000435581" "ENST00000436474" > [85] "ENST00000437244" "ENST00000441131" "ENST00000443019" > "ENST00000443929" "ENST00000444280" "ENST00000445062" > [91] "ENST00000445777" "ENST00000445785" "ENST00000445792" > "ENST00000447472" "ENST00000447786" "ENST00000448477" > [97] "ENST00000449611" "ENST00000452144" "ENST00000453953" > "ENST00000455739" "ENST00000456370" "ENST00000460206" > [103] "ENST00000460621" "ENST00000460672" "ENST00000461007" > "ENST00000461691" "ENST00000462195" "ENST00000463317" > [109] "ENST00000463763" "ENST00000464205" "ENST00000464935" > "ENST00000467626" "ENST00000468169" "ENST00000469624" > [115] "ENST00000474361" "ENST00000474865" "ENST00000475167" > "ENST00000475259" "ENST00000475594" "ENST00000475859" > [121] "ENST00000476066" "ENST00000477110" "ENST00000477636" > "ENST00000477940" "ENST00000478256" "ENST00000478825" > [127] "ENST00000479401" "ENST00000479438" "ENST00000479687" > "ENST00000481245" "ENST00000482170" "ENST00000482293" > [133] "ENST00000482405" "ENST00000483079" "ENST00000483286" > "ENST00000483543" "ENST00000484026" "ENST00000484364" > [139] "ENST00000484415" "ENST00000484611" "ENST00000485332" > "ENST00000486791" "ENST00000488344" "ENST00000489233" > [145] "ENST00000491683" "ENST00000492963" "ENST00000493312" > "ENST00000494962" "ENST00000494969" "ENST00000496011" > [151] "ENST00000496301" "ENST00000496630" "ENST00000497752" > "ENST00000498153" "ENST00000501036" "ENST00000503018" > [157] "ENST00000507418" "ENST00000509780" "ENST00000515319" > "ENST00000527459" "ENST00000534940" "ENST00000540897" > [163] "ENST00000554971" > > > Thanks, > Jeremy >
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