Brett will contact this ICGC user, if he hasn't done so already, We are working on new documentation to explain and make all of this more transparent to the community.
thank you all for your patience, and cheers to all! f. -- B.F. Francis Ouellette http://oicr.on.ca/person/francis-ouellette On 2011-11-08, at 6:44 PM, Arek Kasprzyk wrote: I guess Brett is MIA ;) Francis: would you be able to help Claude with that? a On Fri, Nov 4, 2011 at 2:43 PM, Arek Kasprzyk <[email protected]<mailto:[email protected]>> wrote: Hi Claude, The ICGC WGS files are supposed to be deposited to EGA@EBI. I think the Spanish project is already deposited there. Perhaps some of the others too. If they are not there then they are most likely to be still with the centers that generated the data. The TCGA data included in the ICGC Portal is deposited elsewhere. I am cc'ing Brett Whitty who runs the ICGC Portal and liaises with all data providers. He will be able to give you more detailed information where everything is a On Fri, Nov 4, 2011 at 2:07 PM, Claude Chelala <[email protected]<mailto:[email protected]>> wrote: If you can help us get one of the ICGC or sanger whole genome sequence raw data file? Claude On 04/11/2011 18:04, "Arek Kasprzyk" <[email protected]<http://[email protected]/>> wrote: Hi Claude, sorry, what projects are you talking about exactly? a On Fri, Nov 4, 2011 at 2:00 PM, Claude Chelala <[email protected]<http://[email protected]/>> wrote: Hi Arek I was wondering if you could advise/help me to get a whole genome sequence data file. There are none deposited in public repositories and not sure whom to ask. Anonymous data is fine, we just need to test if our server can cope with data analysis pipeline. Thanks Claude This email may contain information that is privileged, confidential or otherwise protected from disclosure. It must not be used by, or its contents copied or disclosed to, persons other than the addressee. If you have received this email in error please notify the sender immediately and delete the email. This message has been scanned for viruses.
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