Dear Yaolan,
Please go to central.biomart.org and choose "Database Search"/"Genome".
Then choose "Ensembl Genes 64", Click next, In the filter page you can
select filtering criteria (e.g known genes) or just click next. In the
attributes page please select  "External References" and choose some of the
following attributes:

MIM Morbid accession
MIM Morbid description
MIM Gene Accession
MIM Gene Description

hope this helps,
a


On Thu, Dec 15, 2011 at 8:44 PM, Yaolan <[email protected]> wrote:

> How can I extract all gene phenotype associations in omim using biomart?
>
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