Hi Olivier, no problem. I have forwarded a request to run update to pick up your latest datasets in our Central Portal.
a On Wed, Apr 18, 2012 at 10:27 AM, Olivier Arnaiz <[email protected]>wrote: > > Le 18 avr. 12 à 16:25, Arek Kasprzyk a écrit : > > Hi Olivier, > When did you guys update your service? > > > long time ago ... > > did you notify the "users" mailing list? > > > I did not :-/ . This is probably the issue. thanks. > > > If not, this is probably just a question of the update on our side > > > a > > > On Wed, Apr 18, 2012 at 10:14 AM, Olivier Arnaiz > <[email protected]>wrote: > >> Yes but it does not work for the 4 other datasets : >> >> 'micronuclear_ies' >> >> 'macronuclear_exon' >> >> 'macronuclear_intergenic' >> >> 'macronuclear_intron' >> >> It is true, they are quite new ... >> >> >> >> Thanks >> Olivier >> >> >> >> Le 18 avr. 12 à 16:06, Arek Kasprzyk a écrit : >> >> Hi Oliver, >> I quickly checked and everything seems to be working fine on our side: >> >> http://www.biomart.org/biomart/martservice?type=datasets&mart=biomartDB >> >> http://www.biomart.org/biomart/martservice?type=attributes&dataset=macronuclear >> >> >> >> I am cc'ing Steffen who is the R expert. Perhaps he can shed some light >> on it >> >> a >> >> >> On Tue, Apr 17, 2012 at 12:00 PM, Olivier Arnaiz >> <[email protected]>wrote: >> >>> Hi Arek, >>> >>> To the central portal. >>> >>> Thanks >>> Olivier >>> >>> Le 17 avr. 12 à 16:38, Arek Kasprzyk a écrit : >>> >>> Hi Olivier, >>> is your R interface talking to the >>> >>> http://www.biomart.org/biomart/martview >>> >>> or >>> >>> http://paramecium.cgm.cnrs-gif.fr/biomart/martview >>> >>> ? >>> >>> >>> a >>> >>> >>> On Mon, Apr 16, 2012 at 4:34 AM, Olivier Arnaiz >>> <[email protected]>wrote: >>> >>>> Hello, >>>> >>>> I am the parameciumDB's developper. >>>> I would like to use the R interface : "biomaRt", but i can not see all >>>> my datasets in the database "PARAMECIUM GENOME (CNRS FRANCE)" ... >>>> >>>> http://paramecium.cgm.cnrs-gif.fr/biomart/martview >>>> >>>> Is it normal ? How can I fix the problem ? >>>> >>>> Thanks >>>> >>>> Best >>>> Olivier Arnaiz >>>> >>>> >>>> >>>> >>>> -- >>>> Olivier Arnaiz >>>> CGM UPR3404 - CNRS >>>> 91198 Gif-sur-Yvette >>>> 01 69 82 43 75 >>>> >>>> ParameciumDB: >>>> http://paramecium.cgm.cnrs-gif.fr/ >>>> Cildb >>>> http://cildb.cgm.cnrs-gif.fr >>>> >>>> >>>> >>>> >>>> >>>> >>> >>> >>> >>> -- >>> Olivier Arnaiz >>> CGM UPR3404 - CNRS >>> 91198 Gif-sur-Yvette >>> 01 69 82 43 75 >>> >>> ParameciumDB: >>> http://paramecium.cgm.cnrs-gif.fr/ >>> Cildb >>> http://cildb.cgm.cnrs-gif.fr >>> >>> >>> >>> >>> >>> >> >> -- >> Olivier Arnaiz >> CGM UPR3404 - CNRS >> 91198 Gif-sur-Yvette >> 01 69 82 43 75 >> >> ParameciumDB: >> http://paramecium.cgm.cnrs-gif.fr/ >> Cildb >> http://cildb.cgm.cnrs-gif.fr >> >> >> >> >> >> > > -- > Olivier Arnaiz > CGM UPR3404 - CNRS > 91198 Gif-sur-Yvette > 01 69 82 43 75 > > ParameciumDB: > http://paramecium.cgm.cnrs-gif.fr/ > Cildb > http://cildb.cgm.cnrs-gif.fr > > > > > > -- Arek Kasprzyk, MD, MSc, PhD BioMart Project Lead www.biomart.org
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