Hi Sebastian, The GNF assignements are not generated by the BioMart software but have been prepared as a part of pre-processing of the Ensembl data. If you want know more details about this process please send an email to [email protected]. I am also cc'ing Damian Smedley in case he wants to comment on this
a On Fri, May 11, 2012 at 4:24 AM, Sebastian Köhler < [email protected]> wrote: > Hi, > > using Biomart 0.7 I can retrieve lists of genes together with the > GNF/Atlas organ in which the genes are expressed. > > I would like to know how the binary "GNF/Atlas organism part" expression > is created. Is this binary data (i.e. gene X IS expressed in liver and IS > NOT in brain) generated by the Biomart-software? AFAIK, GNF only provides > raw expression data. > > The question has been asked here as well: > http://groups.google.com/group/biogps/browse_thread/thread/f9b0823e559b3d46 > However, I wasn't able to find an answer to this. > > Can somebody help? > Thanks in advance, > > Sebastian Köhler > > -- > Sebastian Köhler, M.Sc. bioinformatics > Institute for Medical Genetics and Human Genetics > University Hospital Charité > Augustenburger Platz 1 > 13353 Berlin > Germany > voice: 49-30-450569135 > email: [email protected] > web: http://goo.gl/kj5r2 > > _______________________________________________ > Users mailing list > [email protected] > https://lists.biomart.org/mailman/listinfo/users >
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