Hi Arek, Thanks for the feedback. Its strange as all was going well. I still suspect the update to the latest Mac command line tools caused something. I am running OS X version 10.8.3, but I do not think that is relevant.
Regards. From: Arek Kasprzyk <[email protected]<mailto:[email protected]>> Date: Thursday, 23 May, 2013 2:38 PM To: El-Badrawi Rachad <[email protected]<mailto:[email protected]>> Cc: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>>, "Rashad B." <[email protected]<mailto:[email protected]>> Subject: Re: [BioMart Users] Biomart on Mountain Lion Hi Rashad, I have just checked again on my Mac OS X Lion 10.7.5 and it built without problems. I don't think rc6 was ever tested on Mountain Lion so perhaps somebody else would be able to add something more helpful here a On 22 May 2013 18:17, El-Badrawi Rachad <[email protected]<mailto:[email protected]>> wrote: Hi, In case anyone is familiar with running Biomart on mac: I have been using Biomart on my Mountain Lion with no problems, benefiting from the mac command line tools package, until I updated the command line tools to the latest version. My understanding is that upon doing that, I had to re-build my Biomart installation using ant. However, this did not work, and the build process fails with the following errors: BUILD FAILED /Users/elbadr/ElbadrFiles/IRCM/DrugNet/Biomart/release-0_8-candidate_6/build.xml:196: IOException in /Users/elbadr/ElbadrFiles/IRCM/DrugNet/Biomart/release-0_8-candidate_6/dist/web/webapps/martapps/_js_includes.jsp - java.io.IOException: Failed to delete /Users/elbadr/ElbadrFiles/IRCM/DrugNet/Biomart/release-0_8-candidate_6/dist/web/webapps/martapps/_js_includes.jsp while trying to rename /Users/elbadr/ElbadrFiles/IRCM/DrugNet/Biomart/release-0_8-candidate_6/dist/web/webapps/martapps/rep5565059420460101763.tmp There is no such file, though. This happens at the end of the Build process, and obviously, when running the martconfigurator, it cannot find the classes it needs. Regards, Rashad _______________________________________________ Users mailing list [email protected]<mailto:[email protected]> https://lists.biomart.org/mailman/listinfo/users _______________________________________________ Users mailing list [email protected] https://lists.biomart.org/mailman/listinfo/users
