Hello David, > I tried this on another cluster and got the results below. I didn’t use > simfactory on it either. Does this also fail to build? And if so what is the error message?
If possible please include the full output of: make fixedmhd-realclean export VERBOSE=yes make fixedmhd 2>&1 | tee make.log Yours, Roland > > -DG > > > On Mar 20, 2018, at 11:47 AM, Roland Haas <[email protected]> > > wrote: > > > > Hello DG, > > > > it could be that something failed while MPI was compiled. Would you mind > > attaching the following files from inside of your Cactus tree, please? > > > > configs/sim/bindings/Configuration/Capabilities/make.MPI.defn > > INC_DIRS += $(MPI_INC_DIRS) > INC_DIRS_F += $(MPI_LIB_DIRS) > MPI_BUILD = 1 > MPI_INSTALL_DIR = > HWLOC_DIR = > CCTK_MPI = 1 > MPI_DIR = /home/garrison/Cactus/configs/fixedmhd/scratch/external/MPI > MPI_INC_DIRS = > /home/garrison/Cactus/configs/fixedmhd/scratch/external/MPI/include > MPI_LIB_DIRS = /home/garrison/Cactus/configs/fixedmhd/scratch/external/MPI/lib > MPI_LIBS = mpi_usempif08 mpi_usempi_ignore_tkr mpi_mpifh mpi_cxx mpi > open-rte open-pal rt util > HAVE_CAPABILITY_MPI = 1 > > > configs/sim/bindings/Configuration/Capabilities/make.HDF5.defn > > include > /home/garrison/Cactus/configs/fixedmhd/bindings/Configuration/Capabilities/make.MPI.defn > include > /home/garrison/Cactus/configs/fixedmhd/bindings/Configuration/Capabilities/make.ZLIB.defn > INC_DIRS += $(HDF5_INC_DIRS) > INC_DIRS_F += $(HDF5_INC_DIRS) > HDF5_BUILD = 1 > HDF5_ENABLE_CXX = no > HDF5_ENABLE_FORTRAN = yes > LIBSZ_DIR = > LIBZ_DIR = > HDF5_INSTALL_DIR = > HDF5_DIR = > /home/garrison/Cactus/configs/fixedmhd/scratch/external/HDF5 > HDF5_ENABLE_CXX = no > HDF5_ENABLE_FORTRAN = yes > HDF5_INC_DIRS = > /home/garrison/Cactus/configs/fixedmhd/scratch/external/HDF5/lib > /home/garrison/Cactus/configs/fixedmhd/scratch/external/HDF5/include > /home/garrison/Cactus/configs/fixedmh > d/scratch/external/HDF5/lib > HDF5_LIB_DIRS = > /home/garrison/Cactus/configs/fixedmhd/scratch/external/HDF5/lib > HDF5_LIBS = hdf5hl_fortran hdf5_fortran hdf5_hl hdf5 m z > HAVE_CAPABILITY_HDF5 = 1 > > > > configs/sim/bindings/Configuration/Capabilities/make.HDF5.deps > > include > /home/garrison/Cactus/configs/fixedmhd/bindings/Configuration/Capabilities/make.MPI.deps > include > /home/garrison/Cactus/configs/fixedmhd/bindings/Configuration/Capabilities/make.ZLIB.deps > > > > as well as > > > > confis/sim/config-info (as well as the option list that you used)? > > # CONFIGURATION : fixedmhd > # CONFIG-DATE : Sun Mar 18 02:24:53 2018 (GMT) > # CONFIG-HOST : singularity.cluster.internal > # CONFIG-STATUS : 0 > # CONFIG-OPTIONS : > MPI_DIR=BUILD > > > > > > If possible also the full output of: > > > > export VERBOSE=yes > > simfactory/bin/sim build 2>&1 | tee make.log > > > > or > > > > export VERBOSE=yes > > make sim 2>&1 | tee make.log > > > > (depending on whether you used simfactory or not), please? > > > > Yours, > > Roland > > > >> Hello, > >> > >> Every time I try to compile my code I get the following error. > >> > >> COMPILING arrangements/CactusPUGHIO/IOHDF5Util/src/Startup.c > >> /share/apps/hdf5-1.8.12/include/H5public.h(61): catastrophic error: cannot > >> open source file "mpi.h" > >> # include <mpi.h> > >> > >> This is new as of the most recent versions of Cactus. Previous > >> compilations of the same code on the same cluster did not result in this > >> error. Any help is appreciated. > >> > >> I used the config option: MPI_DIR = BUILD > >> > >> -DG > >> > >> Sent from my iPhone > >> _______________________________________________ > >> Users mailing list > >> [email protected] > >> http://lists.einsteintoolkit.org/mailman/listinfo/users > > > > > > Yours, > > Roland > > > > > > -- > > My email is as private as my paper mail. I therefore support encrypting > > and signing email messages. Get my PGP key from http://pgp.mit.edu . > -- My email is as private as my paper mail. I therefore support encrypting and signing email messages. Get my PGP key from http://pgp.mit.edu .
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