May be just use .sge_request for user and set -V for env variable export and -v env=vale, set value Or global setting sge_request It seems that one can also use prolog for site or for user@ to set some env for queue
Sent from my iPad Hung-Sheng Tsao ( LaoTsao) Ph.D On May 12, 2011, at 4:14 AM, "Esztermann, Ansgar" <[email protected]> wrote: > > On May 11, 2011, at 18:11 , Reuti wrote: > >> What about "adjusting" the file for the environment in the spool >> directory of the job by start_proc_args? For each job there is a >> directory on the master node of the parallel job and inside the to be >> changed file <exec_spool_dir>/<exechost>/active_jobs/ >> <job_id>.<task_id>/environment. > > Thanks, I'll look into that. > >> To distribute it to the slave nodes the `qrsh -inherit -V` can do it. > > That's probably not even necessary -- the problem at hand is that with > OMP_NUM_THREADS unset, (some) jobs will grab an entire node even if assigned > just a few CPUs. However, our PEs are set up with allocation_rules of > $pe_slots or n (where n is the number of cores on the node), so multi-node > jobs never have to share any of their nodes. > > > A. > > -- > Ansgar Esztermann > DV-Systemadministration > Max-Planck-Institut für biophysikalische Chemie, Abteilung 105 > > > _______________________________________________ > users mailing list > [email protected] > https://gridengine.org/mailman/listinfo/users _______________________________________________ users mailing list [email protected] https://gridengine.org/mailman/listinfo/users
