-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 On 14/01/14 03:57, Eric Kaufmann wrote: > I am having issues with a parallel environment and a queue. I > posted this issue before a few weeks ago. When I submit the job it > never gets past qw. I am using GE 6.2u5. I am suing a submission > script. Here is part of the script. > > !/bin/bash #$ -S /bin/bash #$ -l gaussian=1 #$ -l > mem_free=$memFree #$ -o $myScript.stdout #$ -e $myScript.stderr #$ > -pe gauss $nProc #$ -wd `pwd` #$ -m bea #$ -M $USER@ #$ -q > $myQueue > > I assume you are embedding this as some sort of here document in a shell script as grid engine directives aren't normally processed by a shell so you can't use backticks or shell/environment variables.
> Here is the message I get when I run qstat -j. It would be useful to see the full output of qstat -j so we could see how everything has been expanded. William -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.11 (GNU/Linux) Comment: Using GnuPG with Thunderbird - http://www.enigmail.net/ iQIcBAEBAgAGBQJS1Q9+AAoJEKCzH4joEjNW50gP/irOC21KJp6T96tELrPRZ/nW u1wy1a4EK2IKMTXd9owoIEyx1WGyrzuhX2q80MgrY0U83Vp01HYinFQ0RVAlJ+QL bH3OVAain56fyWWEa6rOB9KgNfRMRuHRh4u5Yz/KexBmGQCsUnDPJb/t2TWF/pnD HC52UkAt0jvG8U0lqcqWko+SKyNLDkB8A+AFmw0k1zN675aC5G8FNCL+oNpmxfEv us5VOH3j9RoFRmTNsZ/gdqUMkyNLY6rpHe7GvXWyQolUez2FKXJiVdg1JeZQaqxU +qpqJtfSBHgBrOFJ7L/SUH44fpaehKtrdZEdScY7kBw5HBOy1/xr5ItZ4YfS8Tr7 BcnxQjEK7Ox1wTLZinGdAr+URKXLhd8V6vFEtLepD+MiLL1Kx1DVZ3IxCd/7d/f/ GJBS5gYwM4nm2bCbnGDPFEWlL2lMF65SrDwljcY0GbD5f9t6xKWuSFYgTpWZRwaI az+jv33ySLOgk5u7x8bN9yThBsEyusS7Adqcu+gZmRPSU3/JMeq21BzYmmxRQkcR dqnUwzwWhvNrJinNvDZ9u9V2kdgl1lgO7SeKmfLmLCN636HBc9cHSBsX2s3H4jP8 5chyKVEM1m+0ORfXgbDlYniOlRoORxSsg1v94QbGSeT3Ifh2DGF6wGA3WZBWx9IB DpLNMsrJKR7y75RuzCr3 =5qlN -----END PGP SIGNATURE----- _______________________________________________ users mailing list [email protected] https://gridengine.org/mailman/listinfo/users
