Dear Grid Engine Users,

I have a simple job, which echoes `date` to stdout, that I'm using to test
an Open Grid Engine installation. Running qsub as root the job is run
successfully. However, using another non-superuser, in this case smartmate
user, the output from qacct -j says that the job has exited with exit
status 11. The shepherd trace confirms this (see below).

Would anyone have an idea as to what is going on? Thank you.

<shepherd_trace>
01/14/2014 14:08:56 [0:2723]: shepherd called with uid = 0, euid = 0
01/14/2014 14:08:56 [0:2723]: starting up 2011.11
01/14/2014 14:08:56 [0:2723]: setpgid(2723, 2723) returned 0
01/14/2014 14:08:56 [0:2723]: do_core_binding: "binding" parameter not
found in config file
01/14/2014 14:08:56 [0:2723]: no prolog script to start
01/14/2014 14:08:56 [0:2723]: parent: forked "job" with pid 2724
01/14/2014 14:08:56 [0:2724]: child: starting son(job,
/opt/capitati/ge2011.11/smartmate/spool/exec-1/job_scripts/32, 0);
01/14/2014 14:08:56 [0:2724]: pid=2724 pgrp=2724 sid=2724 old pgrp=2723
getlogin()=root
01/14/2014 14:08:56 [0:2723]: parent: job-pid: 2724
01/14/2014 14:08:56 [0:2724]: reading passwd information for user
'smartmate'
01/14/2014 14:08:56 [0:2724]: setosjobid: uid = 0, euid = 0
01/14/2014 14:08:56 [0:2724]: setting limits
01/14/2014 14:08:56 [0:2724]: RLIMIT_CPU setting: (soft
18446744073709551615(INFINITY), hard 18446744073709551615(INFINITY))
resulting: (soft 18446744073709551615(INFINITY), hard
18446744073709551615(INFINITY))
01/14/2014 14:08:56 [0:2724]: RLIMIT_FSIZE setting: (soft
18446744073709551615(INFINITY), hard 18446744073709551615(INFINITY))
resulting: (soft 18446744073709551615(INFINITY), hard
18446744073709551615(INFINITY))
01/14/2014 14:08:56 [0:2724]: RLIMIT_DATA setting: (soft
18446744073709551615(INFINITY), hard 18446744073709551615(INFINITY))
resulting: (soft 18446744073709551615(INFINITY), hard
18446744073709551615(INFINITY))
01/14/2014 14:08:56 [0:2724]: RLIMIT_STACK setting: (soft
18446744073709551615(INFINITY), hard 18446744073709551615(INFINITY))
resulting: (soft 18446744073709551615(INFINITY), hard
18446744073709551615(INFINITY))
01/14/2014 14:08:56 [0:2724]: RLIMIT_CORE setting: (soft
18446744073709551615(INFINITY), hard 18446744073709551615(INFINITY))
resulting: (soft 18446744073709551615(INFINITY), hard
18446744073709551615(INFINITY))
01/14/2014 14:08:56 [0:2724]: RLIMIT_VMEM/RLIMIT_AS setting: (soft
18446744073709551615(INFINITY), hard 18446744073709551615(INFINITY))
resulting: (soft 18446744073709551615(INFINITY), hard
18446744073709551615(INFINITY))
01/14/2014 14:08:56 [0:2724]: RLIMIT_RSS setting: (soft
18446744073709551615(INFINITY), hard 18446744073709551615(INFINITY))
resulting: (soft 18446744073709551615(INFINITY), hard
18446744073709551615(INFINITY))
01/14/2014 14:08:56 [0:2724]: setting environment
01/14/2014 14:08:56 [0:2724]: Initializing error file
01/14/2014 14:08:56 [0:2724]: switching to intermediate/target user
01/14/2014 14:08:56 [0:2723]: wait3 returned 2724 (status: 2816;
WIFSIGNALED: 0,  WIFEXITED: 1, WEXITSTATUS: 11)
01/14/2014 14:08:56 [0:2723]: job exited with exit status 11
01/14/2014 14:08:56 [0:2723]: reaped "job" with pid 2724
01/14/2014 14:08:56 [0:2723]: job exited not due to signal
01/14/2014 14:08:56 [0:2723]: job exited with status 11
01/14/2014 14:08:56 [0:2723]: now sending signal KILL to pid -2724
01/14/2014 14:08:56 [0:2723]: writing usage file to "usage"
01/14/2014 14:08:56 [0:2723]: no tasker to notify
01/14/2014 14:08:56 [0:2723]: no epilog script to start
</shepherd_trace>

<job_script>
#!/bin/bash
#
#$ -j y
#
#$ -S /bin/bash

echo "Hello World"
echo `date`
</job_script>

Ian Johnson
Software Engineer


Capita Translation and Interpreting
Riverside Court, Huddersfield Road, Delph, Oldham, OL3 5FZ | Tel (UK): +44
845 367 7000 | Tel (US): +1 (800) 579-5010
| [email protected] | Skype ID: ian.johnson_als
www.capitatranslationinterpreting.com
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