Hi,
Am 20.05.2014 um 21:42 schrieb Michael Stauffer:
> Version OGS/GE 2011.11p1 (Rocks 6.1)
>
> I've got a situation where a user's qsub jobs are being run in
> interactive-only queues,
an attached PE makes a queue also a BATCH queue for jobs requesting this PE.
There is no parallel-interactive-only setting.
Maybe a JSV could route a parallel batch job to dedicated queues only.
-- Reuti
> as well a the expected batch-only queue. Here's his command, and below that
> are some specs of my setup. Anyone have any idea how this might happen or
> what I'm missing? I saw this happen yesterday for a job by another user, but
> otherwse qsub jobs seems to be properly going to only all.q. Thanks.
>
> -M
>
> qsub -v ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS=${slots},ANTSPATH=${ANTSPATH}
> -pe unihost $slots -S /bin/bash -cwd -o ${outputTP_Dir}/${subj}_${tp}.stdout
> -e ${outputTP_Dir}/${subj}_${tp}.stderr ${ANTSPATH}antsCorticalThickness.sh
> -d 3 -a $t1 -e ${templateDir}/template.nii.gz -m
> ${templateDir}/masks/templateBrainMaskProbability.nii.gz -f
> ${templateDir}/masks/templateBrainExtractionRegistrationMask.nii.gz -p
> ${templateDir}/priors/prior%02d.nii.gz -t ${templateDir}/templateBrain.nii.gz
> -o ${outputTP_Dir}/${subj}_${tp}_
>
> [root@chead ~]# qstat -u pcook
> 35282 0.60500 antsCortic pcook r 05/20/2014 09:56:42
> [email protected] 2
> 35283 0.60500 antsCortic pcook r 05/20/2014 09:57:27
> [email protected] 2
> 35284 0.60500 antsCortic pcook r 05/20/2014 10:19:36
> [email protected] 2
> 35285 0.60500 antsCortic pcook r 05/20/2014 10:19:50
> [email protected] 2
> 35286 0.60500 antsCortic pcook r 05/20/2014 10:43:01
> [email protected] 2
> 35287 0.60500 antsCortic pcook r 05/20/2014 10:51:37
> [email protected] 2
> 35960 0.60500 antsCortic pcook r 05/20/2014 11:28:11
> [email protected] 2
> 35961 0.60500 antsCortic pcook r 05/20/2014 11:28:12
> [email protected] 2
> 35962 0.60500 antsCortic pcook r 05/20/2014 11:28:12
> [email protected] 2
> 35963 0.60500 antsCortic pcook r 05/20/2014 12:31:56
> [email protected] 2
> 35964 0.60500 antsCortic pcook r 05/20/2014 12:34:17
> [email protected] 2
> 35965 0.60500 antsCortic pcook r 05/20/2014 12:53:47
> [email protected] 2
> 35966 0.60500 antsCortic pcook r 05/20/2014 12:54:45
> [email protected] 2
> 35967 0.60500 antsCortic pcook r 05/20/2014 13:04:26
> [email protected] 2
> 35968 0.60500 antsCortic pcook r 05/20/2014 13:05:13
> [email protected] 2
> 35969 0.60500 antsCortic pcook r 05/20/2014 13:10:23
> [email protected] 2
> 35970 0.60500 antsCortic pcook r 05/20/2014 13:19:27
> [email protected] 2
> 35971 0.60500 antsCortic pcook r 05/20/2014 13:20:57
> [email protected] 2
> 35972 0.60500 antsCortic pcook r 05/20/2014 13:28:03
> [email protected] 2
> 35973 0.60500 antsCortic pcook r 05/20/2014 13:32:47
> [email protected] 2
> 35974 0.60500 antsCortic pcook r 05/20/2014 13:35:31
> [email protected] 2
> 35975 0.60500 antsCortic pcook r 05/20/2014 14:21:19
> [email protected] 2
>
> [root@chead ~]# qconf -sql
> all.q
> qlogin.long.q
> qlogin.q
>
> [root@chead ~]# qconf -sq all.q | grep -e type -e pe_list
> qtype BATCH
> pe_list make mpich mpi orte unihost serial
>
> [root@chead ~]# qconf -sq qlogin.q | grep -e type -e pe_list
> qtype INTERACTIVE
> pe_list make unihost serial
>
> [root@chead ~]# qconf -sq qlogin.long.q | grep -e type -e pe_list
> qtype INTERACTIVE
> pe_list make unihost serial
>
> [root@chead ~]# qconf -srqs
> {
> name limit_user_interactive_slots
> description Limit the users' interactive slots based
> enabled TRUE
> limit users {*} queues {qlogin.q,qlogin.long.q} to slots=6
> }
> {
> name limit_user_slots
> description Limit the users' batch slots
> enabled TRUE
> limit users {*} queues {all.q} to slots=32
> }
>
> [root@chead ~]# qconf -sp unihost
> pe_name unihost
> slots 9999
> user_lists NONE
> xuser_lists NONE
> start_proc_args /bin/true
> stop_proc_args /bin/true
> allocation_rule $pe_slots
> control_slaves FALSE
> job_is_first_task TRUE
> urgency_slots min
> accounting_summary FALSE
>
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