Hi,
You’ve presented your system service configuration. We need to see the
configuration file
<http://jena.apache.org/documentation/fuseki2/fuseki-configuration.html> in:
$FUSEKI_BASE/configuration/text_svc.ttl
It is a ttl file that is interpreted by the assembler system to build the
endpoints and dataset components. This is where the jena-text configuration
info will go. Here is a sample configuration based on info in your service defn:
> # Fuseki configuration for BDRC, configures two endpoints:
> # - /bdrc is read-only
> # - /bdrcrw is read-write
> #
> # This was painful to come up with but the web interface basically allows no
> option
> # and there is no subclass inference by default so such a configuration file
> is necessary.
> #
> # The main doc sources are:
> # - https://jena.apache.org/documentation/fuseki2/fuseki-configuration.html
> # - https://jena.apache.org/documentation/assembler/assembler-howto.html
> # - https://jena.apache.org/documentation/assembler/assembler.ttl
> #
> # See https://jena.apache.org/documentation/fuseki2/fuseki-layout.html for
> the destination of this file.
>
> @prefix fuseki: <http://jena.apache.org/fuseki#> .
> @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
> @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
> @prefix tdb: <http://jena.hpl.hp.com/2008/tdb#> .
> @prefix ja: <http://jena.hpl.hp.com/2005/11/Assembler#> .
> @prefix text: <http://jena.apache.org/text#> .
> @prefix skos: <http://www.w3.org/2004/02/skos/core#> .
> @prefix : <http://base/#> .
>
> [] rdf:type fuseki:Server ;
> fuseki:services (
> :text_svc
> ) .
>
> :text_svc rdf:type fuseki:Service ;
> fuseki:name "text_svc" ; # name of the dataset
> in the url
> fuseki:serviceQuery "query" ; # SPARQL query service
> fuseki:serviceUpdate "update" ; # SPARQL update service
> fuseki:serviceUpload "upload" ; # Non-SPARQL upload service
> fuseki:serviceReadWriteGraphStore "data" ; # SPARQL Graph store
> protocol (read and write)
> fuseki:dataset :text_dataset ;
> .
>
> :text_dataset rdf:type text:TextDataset ;
> text:dataset :tdb_dataset ;
> text:index :lucene_index ;
> .
>
> # using TDB
> :tdb_dataset rdf:type tdb:DatasetTDB ;
> tdb:location "/home/text/tools/apache-jena-fuseki-3.9.0/run/tdb_dataset"
> ;
> tdb:unionDefaultGraph true ;
> .
>
> # Text index description
> :lucene_index a text:TextIndexLucene ;
> text:directory
> <file:/home/text/tools/apache-jena-fuseki-3.9.0/run/lucene_index> ;
> text:storeValues true ;
> text:entityMap :entitymap ;
> .
>
> # Index mappings
> :entitymap a text:EntityMap ;
> text:entityField "uri" ;
> text:uidField "uid" ;
> text:defaultField "label" ;
> text:langField "lang" ;
> text:graphField "graph" ; ## enable graph-specific indexing
> text:map (
> [ text:field "label" ;
> text:predicate skos:prefLabel ]
> ) ;
> .
hth,
Chris
> On Jan 21, 2019, at 5:21 AM, Mikael Pesonen <[email protected]>
> wrote:
>
>
> Hi,
>
>
> On 18/01/2019 18:13, Chris Tomlinson wrote:
>> Hi,
>>
>> 1) If you’re using a default config, it does not have a working jena-text
>> configuration. The config will need to include skos:prefLabel in the entity
>> map.
>>
>> 2) when you change the jena-text in significant ways, such as changing what
>> analyzer is used for a given property and so on, then you’ll need to rebuild
>> the Lucene index via reloading the dataset or using the textIndexer
>> <https://jena.apache.org/documentation/query/text-query.html#building-a-text-index>.
>> I don’t recall this being mentioned as part of your testing
>>
>> 3) Please indicate exactly which item you’re using jena-fuseki-war-3.9.0.war
>> or jena-fuseki-webapp-3.9.0.jar etc, and the config file itself. The error
>> you’ve mentioned previously:
> We are running Fuseki as service
>
> -----
> [Unit]
> Description=Apache Jena Fuseki
>
> [Service]
> Type=simple
> User=fuseki
> #Environment=JAVA_HOME=/usr/lib/jvm/java-8-oracle/
> Environment=FUSEKI_HOME=/home/text/tools/apache-jena-fuseki-3.9.0
> Environment=FUSEKI_BASE=/home/text/tools/apache-jena-fuseki-3.9.0/run
> ExecStart=/usr/bin/java
> -Dlog4j.configuration=file:/home/text/tools/apache-jena-fuseki-3.9.0/log4j.properties
> -Xmx5600M -jar /home/text/tools/apache-jena-fuseki-3.9.0/fuseki-server.jar
> --update --port 3030 --loc=/home/text/tools/jena_data_test/ /ds
>
> [Install]
> WantedBy=multi-user.target
> -----
>
> All settings are default otherwise, we haven't changed any config file.
>
> Are there some minimal settings to this example config so that I could get
> skos:prefLabel working?
>
> https://jena.apache.org/documentation/query/text-query.html#configuration
>
> So when we have a working configuration/assembler file, all is needed is to
> build the index
>
> java -cp $FUSEKI_HOME/fuseki-server.jar jena.textindexer
> --desc=assembler_file ?
>
>
> Thank everyone for the help
>>> Jan 17 17:00:28 semantic-dev java[16800]: [2019-01-17 17:00:28] Config
>>> INFO Load configuration:
>>> file:///home/text/tools/apache-jena-fuseki-3.9.0/run/configuration/text_index.ttl
>>>
>>> <file:///home/text/tools/apache-jena-fuseki-3.9.0/run/configuration/text_index.ttl>
>>> Jan 17 17:00:28 semantic-dev java[16800]: [2019-01-17 17:00:28]
>>> WebAppContext WARN Failed startup of context
>>> o.e.j.w.WebAppContext@4159e81b{Apache Jena Fuseki
>>> Server,/,file:///home/text/tools/apache-jena-fuseki-3.9.0/webapp/,UNAVAILABLE
>>> <file:///home/text/tools/apache-jena-fuseki-3.9.0/webapp/,UNAVAILABLE>}
>>> Jan 17 17:00:28 semantic-dev java[16800]: at
>>> org.apache.jena.fuseki.build.FusekiConfig.readAssemblerFile(FusekiConfig.java:148)
>> suggests to me that something in the config file is confusing the
>> readAssemblerFile. It doesn’t look like it’s failing in the reading the
>> jena-text portion of the config.
>>
>> If http://api.finto.fi/download/mesh/mesh-skos.ttl
>> <http://api.finto.fi/download/mesh/mesh-skos.ttl> the dataset, then can you
>> cut it down to just a small test case with some concepts with “medi” and a
>> few without? That along with the other information should help move this
>> further along..
>>
>> 4) Your query:
>>
>>> PREFIX skos: <http://www.w3.org/2004/02/skos/core#
>>> <http://www.w3.org/2004/02/skos/core#>>
>>> PREFIX text: <http://jena.apache.org/text# <http://jena.apache.org/text#>>
>>> SELECT *
>>> WHERE
>>> {
>>> GRAPH <http://www.yso.fi/onto/mesh/ <http://www.yso.fi/onto/mesh/>>
>>> {
>>> ?concept text:query (skos:prefLabel "medi") .
>>> ?concept skos:prefLabel ?prefLabel .
>>>
>>> # FILTER ( REGEX(?prefLabel, "\\bmedi", "i"))
>>> }
>>> }
>>> limit 10
>> might effectively just be executing:
>>
>>> ?concept skos:prefLabel ?prefLabel .
>> if there is actually no jena-text config - I haven’t checked what happens
>> when there is no TextIndex configured and the text:query is invoked, but may
>> be a noop
>>
>> Thanks,
>> Chris
>>
>>
>>> On Jan 18, 2019, at 8:08 AM, Mikael Pesonen <[email protected]>
>>> wrote:
>>>
>>>
>>>
>>> On 18/01/2019 13:40, Andy Seaborne wrote:
>>>>
>>>> On 17/01/2019 15:45, Mikael Pesonen wrote:
>>>>>
>>>>> On 17/01/2019 17:38, Andy Seaborne wrote:
>>>>>>
>>>>>> On 17/01/2019 12:51, Mikael Pesonen wrote:
>>>>>>>
>>>>>>> On 17/01/2019 13:58, Andy Seaborne wrote:
>>>>>>>>
>>>>>>>> On 16/01/2019 12:50, Mikael Pesonen wrote:
>>>>>>>>> Hi,
>>>>>>>>>
>>>>>>>>> I'm trying to get text search work. Sparql REGEX takes few seconds to
>>>>>>>>> finish so hoping this would be faster. Application is term search
>>>>>>>>> using SKOS ontology.
>>>>>>>>>
>>>>>>>>> First tested if it's enabled by default
>>>>>>>>>
>>>>>>>>> ?concept text:query (skos:prefLabel "medi") .
>>>>>>>>> ?concept skos:prefLabel ?prefLabel
>>>>>>>>>
>>>>>>>>> That returns all concepts so I guess it's not enabled.
>>>>>>>> If it returns all concepts, the first line matched (otherwise you get
>>>>>>>> none). If so, there is a text index and "medi" (case insensitive)
>>>>>>>> matches Lucene rules, everything.
>>>>>>> What does this mean then, why is it matching everything?
>>>>>> If zero matches, you don't get to ?concept skos:prefLabel ?prefLabel (if
>>>>>> the text index is correct)
>>>>>>
>>>>>> The query above, if the index is setup correctly, gets all concepts
>>>>>> where any skos:prefLabel matches "medi" (not just at the start), then
>>>>>> gets all skos:prefLabel for those concepts. That does not mean
>>>>>> ?prefLabel only matches "medi"
>>>>>>
>>>>>> :c skos:prefLabel "medi" ;
>>>>>> skos:prefLabel "Other" .
>>>>>>
>>>>>> will return 2 matches including ?prefLabel="Other"
>>>>> Yes that is how I understood it. But ?concept text:query (skos:prefLabel
>>>>> "medi") returns all concepts, also those that don't have any label
>>>>> having "medi".
>>>> Then I don't understand what is going on.
>>>>
>>>> Do you have a complete, minimal example that someone can use to recreate
>>>> the situation?
>>>>
>>> This is the query:
>>>
>>> PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
>>> PREFIX text: <http://jena.apache.org/text#>
>>> SELECT *
>>> WHERE
>>> {
>>> GRAPH <http://www.yso.fi/onto/mesh/>
>>> {
>>> ?concept text:query (skos:prefLabel "medi") .
>>> ?concept skos:prefLabel ?prefLabel .
>>>
>>> # FILTER ( REGEX(?prefLabel, "\\bmedi", "i"))
>>> }
>>> }
>>> limit 10
>>>
>>> and graph is dump copied from here: https://finto.fi/mesh/en/
>>> end of page "Download this vocabulary"
>>>
>>> So to make clear, we have made zero configuration on jena/fuseki, all is
>>> default from 3.9.0 package.
>>>> Andy
>>> --
>>> Lingsoft - 30 years of Leading Language Management
>>>
>>> www.lingsoft.fi
>>>
>>> Speech Applications - Language Management - Translation - Reader's and
>>> Writer's Tools - Text Tools - E-books and M-books
>>>
>>> Mikael Pesonen
>>> System Engineer
>>>
>>> e-mail: [email protected]
>>> Tel. +358 2 279 3300
>>>
>>> Time zone: GMT+2
>>>
>>> Helsinki Office
>>> Eteläranta 10
>>> FI-00130 Helsinki
>>> FINLAND
>>>
>>> Turku Office
>>> Kauppiaskatu 5 A
>>> FI-20100 Turku
>>> FINLAND
>>>
>>
>
> --
> Lingsoft - 30 years of Leading Language Management
>
> www.lingsoft.fi
>
> Speech Applications - Language Management - Translation - Reader's and
> Writer's Tools - Text Tools - E-books and M-books
>
> Mikael Pesonen
> System Engineer
>
> e-mail: [email protected]
> Tel. +358 2 279 3300
>
> Time zone: GMT+2
>
> Helsinki Office
> Eteläranta 10
> FI-00130 Helsinki
> FINLAND
>
> Turku Office
> Kauppiaskatu 5 A
> FI-20100 Turku
> FINLAND
>
