On 16/01/2023 15:40, Andreas Plank wrote:
Hej-hej,
The problem is still present with version 4.6.0, I could not do
4.7.0
ADD GRAPH <http://botanicalcollections.be/specimen/> TO GRAPH <
http://www.botanicalcollections.be/specimen/>
In the meantime:
- How can one differentiate between if it is a data error or an error due
to jena fuseki.
- If it is because of the data, is there any possibility to repair the
data? (I know, in the worst case one always could eventually throw away all
data and import all anew …)
The error messages are now as follows:
What else is happeing on the server at the same time?
What is the server configuration?
15:11:25 ERROR ParserARQUpdate :: Unexpected throwable:
java.util.ConcurrentModificationException: Iterator: started at 5, now 6
at
org.apache.jena.tdb.sys.DatasetControlMRSW.policyError(DatasetControlMRSW.java:147)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.tdb.sys.DatasetControlMRSW$IteratorCheckNotConcurrent.checkIterConcurrentModification(DatasetControlMRSW.java:103)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.tdb.sys.DatasetControlMRSW$IteratorCheckNotConcurrent.hasNext(DatasetControlMRSW.java:110)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.atlas.iterator.Iter$IterMap.hasNext(Iter.java:412)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.atlas.iterator.Iter$IterMap.hasNext(Iter.java:412)
~[fuseki-server.jar:4.6.0]
at org.apache.jena.atlas.iterator.Iter.hasNext(Iter.java:1104)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.util.iterator.WrappedIterator.hasNext(WrappedIterator.java:103)
~[fuseki-server.jar:4.6.0]
at org.apache.jena.sparql.graph.GraphOps.addAll(GraphOps.java:74)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateEngineWorker.gsAddTriples(UpdateEngineWorker.java:273)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateEngineWorker.lambda$visit$3(UpdateEngineWorker.java:215)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateEngineWorker.executeOperation(UpdateEngineWorker.java:550)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateEngineWorker.visit(UpdateEngineWorker.java:209)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.request.UpdateAdd.visit(UpdateAdd.java:29)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateVisitorSink.send(UpdateVisitorSink.java:45)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateVisitorSink.send(UpdateVisitorSink.java:31)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UsingUpdateSink.send(UsingUpdateSink.java:55)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UsingUpdateSink.send(UsingUpdateSink.java:31)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.SPARQLParserBase.emitUpdate(SPARQLParserBase.java:172)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.arq.ARQParser.Update1(ARQParser.java:1720)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.arq.ARQParser.Update(ARQParser.java:1636)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.arq.ARQParser.UpdateUnit(ARQParser.java:61)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.ParserARQUpdate.executeParse(ParserARQUpdate.java:42)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.UpdateParser.parse(UpdateParser.java:53)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.update.UpdateAction.parseExecute(UpdateAction.java:423)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.update.UpdateAction.parseExecute(UpdateAction.java:381)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.SPARQL_Update.execute(SPARQL_Update.java:229)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.SPARQL_Update.executeForm(SPARQL_Update.java:207)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.SPARQL_Update.execute(SPARQL_Update.java:110)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.ActionService.executeLifecycle(ActionService.java:58)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.SPARQL_Update.execPost(SPARQL_Update.java:91)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.ActionProcessor.process(ActionProcessor.java:34)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.ActionBase.process(ActionBase.java:54)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.ActionExecLib.execActionSub(ActionExecLib.java:124)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.ActionExecLib.execAction(ActionExecLib.java:98)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.server.Dispatcher.dispatchAction(Dispatcher.java:164)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.server.Dispatcher.process(Dispatcher.java:156)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.server.Dispatcher.dispatch(Dispatcher.java:83)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.FusekiFilter.doFilter(FusekiFilter.java:48)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.FilterHolder.doFilter(FilterHolder.java:202)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.ServletHandler$Chain.doFilter(ServletHandler.java:1635)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.ProxiedFilterChain.doFilter(ProxiedFilterChain.java:61)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.executeChain(AdviceFilter.java:108)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.doFilterInternal(AdviceFilter.java:137)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:125)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.ProxiedFilterChain.doFilter(ProxiedFilterChain.java:66)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.executeChain(AdviceFilter.java:108)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.doFilterInternal(AdviceFilter.java:137)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:125)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.ProxiedFilterChain.doFilter(ProxiedFilterChain.java:66)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.executeChain(AdviceFilter.java:108)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.doFilterInternal(AdviceFilter.java:137)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:125)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.ProxiedFilterChain.doFilter(ProxiedFilterChain.java:66)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AbstractShiroFilter.executeChain(AbstractShiroFilter.java:450)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AbstractShiroFilter$1.call(AbstractShiroFilter.java:365)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.subject.support.SubjectCallable.doCall(SubjectCallable.java:90)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.subject.support.SubjectCallable.call(SubjectCallable.java:83)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.subject.support.DelegatingSubject.execute(DelegatingSubject.java:387)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AbstractShiroFilter.doFilterInternal(AbstractShiroFilter.java:362)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:125)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.FilterHolder.doFilter(FilterHolder.java:202)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.ServletHandler$Chain.doFilter(ServletHandler.java:1635)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.CrossOriginFilter.handle(CrossOriginFilter.java:284)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.CrossOriginFilter.doFilter(CrossOriginFilter.java:247)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.FilterHolder.doFilter(FilterHolder.java:210)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.ServletHandler$Chain.doFilter(ServletHandler.java:1635)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:527)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:131)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:578)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:122)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:223)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1571)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:221)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1378)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:176)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:484)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1544)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:174)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1300)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:129)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:122)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.gzip.GzipHandler.handle(GzipHandler.java:822)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:122)
~[fuseki-server.jar:4.6.0]
at org.eclipse.jetty.server.Server.handle(Server.java:562)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.HttpChannel.lambda$handle$0(HttpChannel.java:505)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.HttpChannel.dispatch(HttpChannel.java:762)
~[fuseki-server.jar:4.6.0]
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:497)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:282)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:319)
~[fuseki-server.jar:4.6.0]
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:100)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.io.SelectableChannelEndPoint$1.run(SelectableChannelEndPoint.java:53)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.strategy.AdaptiveExecutionStrategy.runTask(AdaptiveExecutionStrategy.java:412)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.strategy.AdaptiveExecutionStrategy.consumeTask(AdaptiveExecutionStrategy.java:381)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.strategy.AdaptiveExecutionStrategy.tryProduce(AdaptiveExecutionStrategy.java:268)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.strategy.AdaptiveExecutionStrategy.lambda$new$0(AdaptiveExecutionStrategy.java:138)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:407)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:894)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.QueuedThreadPool$Runner.run(QueuedThreadPool.java:1038)
~[fuseki-server.jar:4.6.0]
at java.lang.Thread.run(Unknown Source) ~[?:?]
15:11:25 WARN Fuseki :: [13] ActionErrorException with cause
org.apache.jena.fuseki.servlets.ActionErrorException: Iterator: started at
5, now 6
at
org.apache.jena.fuseki.servlets.ServletOps.errorOccurred(ServletOps.java:275)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.SPARQL_Update.execute(SPARQL_Update.java:259)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.SPARQL_Update.executeForm(SPARQL_Update.java:207)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.SPARQL_Update.execute(SPARQL_Update.java:110)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.ActionService.executeLifecycle(ActionService.java:58)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.SPARQL_Update.execPost(SPARQL_Update.java:91)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.ActionProcessor.process(ActionProcessor.java:34)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.ActionBase.process(ActionBase.java:54)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.ActionExecLib.execActionSub(ActionExecLib.java:124)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.ActionExecLib.execAction(ActionExecLib.java:98)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.server.Dispatcher.dispatchAction(Dispatcher.java:164)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.server.Dispatcher.process(Dispatcher.java:156)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.server.Dispatcher.dispatch(Dispatcher.java:83)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.FusekiFilter.doFilter(FusekiFilter.java:48)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.FilterHolder.doFilter(FilterHolder.java:202)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.ServletHandler$Chain.doFilter(ServletHandler.java:1635)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.ProxiedFilterChain.doFilter(ProxiedFilterChain.java:61)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.executeChain(AdviceFilter.java:108)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.doFilterInternal(AdviceFilter.java:137)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:125)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.ProxiedFilterChain.doFilter(ProxiedFilterChain.java:66)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.executeChain(AdviceFilter.java:108)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.doFilterInternal(AdviceFilter.java:137)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:125)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.ProxiedFilterChain.doFilter(ProxiedFilterChain.java:66)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.executeChain(AdviceFilter.java:108)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AdviceFilter.doFilterInternal(AdviceFilter.java:137)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:125)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.ProxiedFilterChain.doFilter(ProxiedFilterChain.java:66)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AbstractShiroFilter.executeChain(AbstractShiroFilter.java:450)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AbstractShiroFilter$1.call(AbstractShiroFilter.java:365)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.subject.support.SubjectCallable.doCall(SubjectCallable.java:90)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.subject.support.SubjectCallable.call(SubjectCallable.java:83)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.subject.support.DelegatingSubject.execute(DelegatingSubject.java:387)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.AbstractShiroFilter.doFilterInternal(AbstractShiroFilter.java:362)
~[fuseki-server.jar:4.6.0]
at
org.apache.shiro.web.servlet.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:125)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.FilterHolder.doFilter(FilterHolder.java:202)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.ServletHandler$Chain.doFilter(ServletHandler.java:1635)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.CrossOriginFilter.handle(CrossOriginFilter.java:284)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.CrossOriginFilter.doFilter(CrossOriginFilter.java:247)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.FilterHolder.doFilter(FilterHolder.java:210)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.ServletHandler$Chain.doFilter(ServletHandler.java:1635)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:527)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:131)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:578)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:122)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:223)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1571)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:221)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1378)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:176)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:484)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1544)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:174)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1300)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:129)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:122)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.gzip.GzipHandler.handle(GzipHandler.java:822)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:122)
~[fuseki-server.jar:4.6.0]
at org.eclipse.jetty.server.Server.handle(Server.java:562)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.HttpChannel.lambda$handle$0(HttpChannel.java:505)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.HttpChannel.dispatch(HttpChannel.java:762)
~[fuseki-server.jar:4.6.0]
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:497)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:282)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:319)
~[fuseki-server.jar:4.6.0]
at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:100)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.io.SelectableChannelEndPoint$1.run(SelectableChannelEndPoint.java:53)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.strategy.AdaptiveExecutionStrategy.runTask(AdaptiveExecutionStrategy.java:412)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.strategy.AdaptiveExecutionStrategy.consumeTask(AdaptiveExecutionStrategy.java:381)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.strategy.AdaptiveExecutionStrategy.tryProduce(AdaptiveExecutionStrategy.java:268)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.strategy.AdaptiveExecutionStrategy.lambda$new$0(AdaptiveExecutionStrategy.java:138)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:407)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:894)
~[fuseki-server.jar:4.6.0]
at
org.eclipse.jetty.util.thread.QueuedThreadPool$Runner.run(QueuedThreadPool.java:1038)
~[fuseki-server.jar:4.6.0]
at java.lang.Thread.run(Unknown Source) ~[?:?]
Caused by: org.apache.jena.query.QueryException: Iterator: started at 5,
now 6
at
org.apache.jena.sparql.lang.ParserARQUpdate.executeParse(ParserARQUpdate.java:67)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.UpdateParser.parse(UpdateParser.java:53)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.update.UpdateAction.parseExecute(UpdateAction.java:423)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.update.UpdateAction.parseExecute(UpdateAction.java:381)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.SPARQL_Update.execute(SPARQL_Update.java:229)
~[fuseki-server.jar:4.6.0]
... 73 more
Caused by: java.util.ConcurrentModificationException: Iterator: started at
5, now 6
at
org.apache.jena.tdb.sys.DatasetControlMRSW.policyError(DatasetControlMRSW.java:147)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.tdb.sys.DatasetControlMRSW$IteratorCheckNotConcurrent.checkIterConcurrentModification(DatasetControlMRSW.java:103)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.tdb.sys.DatasetControlMRSW$IteratorCheckNotConcurrent.hasNext(DatasetControlMRSW.java:110)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.atlas.iterator.Iter$IterMap.hasNext(Iter.java:412)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.atlas.iterator.Iter$IterMap.hasNext(Iter.java:412)
~[fuseki-server.jar:4.6.0]
at org.apache.jena.atlas.iterator.Iter.hasNext(Iter.java:1104)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.util.iterator.WrappedIterator.hasNext(WrappedIterator.java:103)
~[fuseki-server.jar:4.6.0]
at org.apache.jena.sparql.graph.GraphOps.addAll(GraphOps.java:74)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateEngineWorker.gsAddTriples(UpdateEngineWorker.java:273)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateEngineWorker.lambda$visit$3(UpdateEngineWorker.java:215)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateEngineWorker.executeOperation(UpdateEngineWorker.java:550)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateEngineWorker.visit(UpdateEngineWorker.java:209)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.request.UpdateAdd.visit(UpdateAdd.java:29)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateVisitorSink.send(UpdateVisitorSink.java:45)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UpdateVisitorSink.send(UpdateVisitorSink.java:31)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UsingUpdateSink.send(UsingUpdateSink.java:55)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.modify.UsingUpdateSink.send(UsingUpdateSink.java:31)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.SPARQLParserBase.emitUpdate(SPARQLParserBase.java:172)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.arq.ARQParser.Update1(ARQParser.java:1720)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.arq.ARQParser.Update(ARQParser.java:1636)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.arq.ARQParser.UpdateUnit(ARQParser.java:61)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.ParserARQUpdate.executeParse(ParserARQUpdate.java:42)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.sparql.lang.UpdateParser.parse(UpdateParser.java:53)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.update.UpdateAction.parseExecute(UpdateAction.java:423)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.update.UpdateAction.parseExecute(UpdateAction.java:381)
~[fuseki-server.jar:4.6.0]
at
org.apache.jena.fuseki.servlets.SPARQL_Update.execute(SPARQL_Update.java:229)
~[fuseki-server.jar:4.6.0]
... 73 more
15:11:25 INFO Fuseki :: [13] 500 Server Error (178 ms)
Am Do., 12. Jan. 2023 um 12:12 Uhr schrieb Andy Seaborne <[email protected]>:
On 12/01/2023 10:40, Andreas Plank wrote:
Hej-hej,
I could not upgrade yet, but would Fuseki UI version 4.7.0 also work fine
for this issue?
Quite possibly.
The problem description isn't a complete example, which is why trying it
is the way to find out.
Andy
Kind Regards
Andreas
Am Do., 11. Aug. 2022 um 12:51 Uhr schrieb Andy Seaborne <
[email protected]>:
Hi Andreas,
Could you please try a newer version - 4.3.2 or 4.4.0 (not 4.5.0 which a
different problem in this area).
Andy
