Hi I am trying to setup SGE to run DLPOLY compiled with mpif90 (OpenMPI 1.2b2, pathscale Fortran compilers and gcc c/c++). In general I am much more luckier running DLPOLY interactively then using SGE. The error that I got is: Signal:7 info.si_errno:0(Success) si_code:2()[1]. A previous message in the list[2], says that this is more likely to be a configuration problem. But what kind of configuration? It is in the run time?
Another error that I got sometimes is related with "writev"[3] But this is pretty rare. My network is Gigabit, OS is Red Hat EL 4 the nodes are dual core Opteron 275 (4 cores). I did not use any (except for prefix) option during the configuration process Any suggestion? Thanks Marcelo Garcia [1] [ocf@master TEST2]$ mpirun -np 16 --hostfile /home/ocf/SRIFBENCH/DLPOLY3/data/nodes_16_slots4.txt /home/ocf/SRIFBENCH/DLPOLY3/execute/DLPOLY.Y Signal:7 info.si_errno:0(Success) si_code:2() Failing at addr:0x5107b0 (...) [2] http://www.open-mpi.org/community/lists/users/2007/01/2423.php [3] [node007:05003] mca_btl_tcp_frag_send: writev failed with errno=104 [node007:05004] mca_btl_tcp_frag_send: writev failed with errno=104 [node006:05170] mca_btl_tcp_frag_send: writev failed with errno=104 [node007:05005] mca_btl_tcp_frag_send: writev failed with errno=104 [node007:05006] mca_btl_tcp_frag_send: writev failed with errno=104 [node006:05170] mca_btl_tcp_frag_send: writev failed with errno=104 [node006:05171] mca_btl_tcp_frag_send: writev failed with errno=104 [node006:05171] mca_btl_tcp_frag_send: writev failed with errno=104 [node006:05172] mca_btl_tcp_frag_send: writev failed with errno=104 [node006:05172] mca_btl_tcp_frag_send: writev failed with errno=104 [node006:05173] mca_btl_tcp_frag_send: writev failed with errno=104 [node006:05173] mca_btl_tcp_frag_send: writev failed with errno=104 mpirun noticed that job rank 0 with PID 0 on node node003 exited on signal 48. 15 additional processes aborted (not shown)
