Correct -- OS X [still] does not ship a Fortran compiler (which is why
they opted to not include Fortran support in their Open MPI). :-(
FWIW, I tend to use these compilers on my MacBook pro with Leopard:
http://hpc.sourceforge.net/
On Dec 17, 2008, at 8:07 AM, John Fink wrote:
Boy, it sure looks that way, doesn't it? So I guess the solution is
to compile a new openmpi directly on my xgrid controller and push
that binary to all the agents. I should probably do this anyway as
the program I am trying to run is a FORTRAN program, and I'm meant
to understand that Apple's OpenMPI doesn't support FORTRAN either.
Hoo boy. Thanks Doug, Ethan and Jeff.
jf
On Wed, Dec 17, 2008 at 10:29 AM, Doug Reeder <d...@rain.org> wrote:
I believe that the openmpi that comes with leopard doesn't support
xgrid. If you type ompi_info|grep xgrid you get nothing. I'm not
sure what apple was thinking.
Doug Reeder
On Dec 17, 2008, at 6:30 AM, Ethan Mallove wrote:
Hi John,
I'm forwarding your question to the Open MPI users list.
Regards,
Ethan
On Wed, Dec/17/2008 08:35:00AM, John Fink wrote:
Hello OpenMPI folks,
I've got a large pool of Macs running Leopard that are all on an
xgrid.
However, I can't seem to use the mpirun that comes with Leopard
with the
xgrid. I've got my grid and password environment variables set up
okay on
my controller, all the xgrid command line commands work
(displaying grid
IDs, things like that) but mpirun only wants to run things on the
local
host.
I'm extremely new to OpenMPI and only slightly less new to Macs so
there's
probably something very obvious that I'm missing, but I'm trying
what's
detailed on this page:
http://www.macresearch.org/runing_mpi_job_through_xgrid (the /bin/
hostname
example). Here's my output:
as-0003-l:~ locadmin$ mpirun -n 8 /bin/hostname
as-0003-l.lib.mcmaster.ca
as-0003-l.lib.mcmaster.ca
as-0003-l.lib.mcmaster.ca
as-0003-l.lib.mcmaster.ca
as-0003-l.lib.mcmaster.ca
as-0003-l.lib.mcmaster.ca
as-0003-l.lib.mcmaster.ca
as-0003-l.lib.mcmaster.ca
Issuing the same command with -nolocal yields the following:
as-0003-l:~ locadmin$ mpirun --nolocal -n 8 /bin/hostname
--------------------------------------------------------------------------
There are no available nodes allocated to this job. This could be
because
no nodes were found or all the available nodes were already used.
Note that since the -nolocal option was given no processes can be
launched on the local node.
--------------------------------------------------------------------------
[as-0003-l.lib.mcmaster.ca:82776] [0,0,0] ORTE_ERROR_LOG:
Temporarily out
of resource in file
/SourceCache/openmpi/openmpi-5/openmpi/orte/mca/rmaps/base/
rmaps_base_support_fns.c
at line 168
[as-0003-l.lib.mcmaster.ca:82776] [0,0,0] ORTE_ERROR_LOG:
Temporarily out
of resource in file
/SourceCache/openmpi/openmpi-5/openmpi/orte/mca/rmaps/round_robin/
rmaps_rr.c
at line 402
[as-0003-l.lib.mcmaster.ca:82776] [0,0,0] ORTE_ERROR_LOG:
Temporarily out
of resource in file
/SourceCache/openmpi/openmpi-5/openmpi/orte/mca/rmaps/base/
rmaps_base_map_job.c
at line 210
[as-0003-l.lib.mcmaster.ca:82776] [0,0,0] ORTE_ERROR_LOG:
Temporarily out
of resource in file
/SourceCache/openmpi/openmpi-5/openmpi/orte/mca/rmgr/urm/
rmgr_urm.c at
line 372
[as-0003-l.lib.mcmaster.ca:82776] mpirun: spawn failed with errno=-3
Thanks very much for any help you can provide!
jf
--
http://libgrunt.blogspot.com -- library culture and technology.
References
Visible links
. http://www.macresearch.org/runing_mpi_job_through_xgrid
. http://as-0003-l.lib.mcmaster.ca/
. http://as-0003-l.lib.mcmaster.ca/
. http://as-0003-l.lib.mcmaster.ca/
. file:///tmp/http:/as-0003-l.lib.mcmaster.ca:82776
. file:///tmp/http:/as-0003-l.lib.mcmaster.ca:82776
. file:///tmp/http:/as-0003-l.lib.mcmaster.ca:82776
. file:///tmp/http:/as-0003-l.lib.mcmaster.ca:82776
. file:///tmp/http:/as-0003-l.lib.mcmaster.ca:82776
. http://libgrunt.blogspot.com/
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